Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CFTRP13569 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CFTRP13569 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC9.57□□□□□ -0.88
CFTRP13569 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC9.57□□□□□ -0.88
CFTRP13569 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CFTRP13569 SNORA51.8-201ENST00000384234 132 ntBASIC9.57□□□□□ -0.88
CFTRP13569 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC9.57□□□□□ -0.88
CFTRP13569 AL590139.1-201ENST00000416267 400 ntBASIC9.57□□□□□ -0.88
CFTRP13569 AC093162.1-201ENST00000419682 124 ntBASIC9.57□□□□□ -0.88
CFTRP13569 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC9.57□□□□□ -0.88
CFTRP13569 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC9.57□□□□□ -0.88
CFTRP13569 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
CFTRP13569 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC9.57□□□□□ -0.88
CFTRP13569 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC9.57□□□□□ -0.88
CFTRP13569 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC9.57□□□□□ -0.88
CFTRP13569 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC9.57□□□□□ -0.88
CFTRP13569 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CFTRP13569 INTS6P1-201ENST00000504674 2530 ntBASIC9.57□□□□□ -0.88
CFTRP13569 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CFTRP13569 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CFTRP13569 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
CFTRP13569 AC092724.1-201ENST00000624623 3397 ntBASIC9.56□□□□□ -0.88
CFTRP13569 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
CFTRP13569 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
CFTRP13569 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
CFTRP13569 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
CFTRP13569 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CFTRP13569 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CFTRP13569 AL133388.1-201ENST00000404509 287 ntBASIC9.56□□□□□ -0.88
CFTRP13569 RNA5SP487-201ENST00000410186 122 ntBASIC9.56□□□□□ -0.88
CFTRP13569 TRY2P-201ENST00000448860 689 ntBASIC9.56□□□□□ -0.88
CFTRP13569 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC9.56□□□□□ -0.88
CFTRP13569 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC9.56□□□□□ -0.88
CFTRP13569 RN7SKP99-201ENST00000517028 307 ntBASIC9.56□□□□□ -0.88
CFTRP13569 MIR3934-201ENST00000579806 107 ntBASIC9.56□□□□□ -0.88
CFTRP13569 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
CFTRP13569 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
CFTRP13569 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC9.56□□□□□ -0.88
CFTRP13569 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC9.56□□□□□ -0.88
CFTRP13569 OLMALINC-203ENST00000641087 3779 ntBASIC9.56□□□□□ -0.88
CFTRP13569 AC114876.1-201ENST00000490962 1366 ntBASIC9.55□□□□□ -0.88
CFTRP13569 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC9.55□□□□□ -0.88
CFTRP13569 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC9.55□□□□□ -0.88
CFTRP13569 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC9.55□□□□□ -0.88
CFTRP13569 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC9.55□□□□□ -0.88
CFTRP13569 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC9.55□□□□□ -0.88
CFTRP13569 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC9.55□□□□□ -0.88
CFTRP13569 SLC25A14P1-201ENST00000502867 901 ntBASIC9.55□□□□□ -0.88
CFTRP13569 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
CFTRP13569 HMGB1P44-201ENST00000508597 572 ntBASIC9.55□□□□□ -0.88
CFTRP13569 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC9.55□□□□□ -0.88
CFTRP13569 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC9.55□□□□□ -0.88
CFTRP13569 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC9.55□□□□□ -0.88
CFTRP13569 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC9.55□□□□□ -0.88
CFTRP13569 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
CFTRP13569 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
CFTRP13569 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
CFTRP13569 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
CFTRP13569 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
CFTRP13569 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
CFTRP13569 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
CFTRP13569 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC9.55□□□□□ -0.88
CFTRP13569 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC9.55□□□□□ -0.88
CFTRP13569 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CFTRP13569 OR4K12P-201ENST00000406538 961 ntBASIC9.54□□□□□ -0.88
CFTRP13569 RNU6ATAC21P-201ENST00000408656 126 ntBASIC9.54□□□□□ -0.88
CFTRP13569 AC091390.1-201ENST00000433904 331 ntBASIC9.54□□□□□ -0.88
CFTRP13569 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC9.54□□□□□ -0.88
CFTRP13569 AL672138.1-201ENST00000450604 1015 ntBASIC9.54□□□□□ -0.88
CFTRP13569 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC9.54□□□□□ -0.88
CFTRP13569 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC9.54□□□□□ -0.88
CFTRP13569 RN7SKP147-201ENST00000517154 244 ntBASIC9.54□□□□□ -0.88
CFTRP13569 BNIP3P1-201ENST00000547295 580 ntBASIC9.54□□□□□ -0.88
CFTRP13569 AC007346.2-201ENST00000564816 892 ntBASIC9.54□□□□□ -0.88
CFTRP13569 AC011497.2-201ENST00000600255 639 ntBASIC9.54□□□□□ -0.88
CFTRP13569 AC112694.2-201ENST00000623697 768 ntBASIC9.54□□□□□ -0.88
CFTRP13569 AC130448.2-201ENST00000624082 374 ntBASIC9.54□□□□□ -0.88
CFTRP13569 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CFTRP13569 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CFTRP13569 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
CFTRP13569 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
CFTRP13569 AP004289.1-201ENST00000436307 2205 ntBASIC9.54□□□□□ -0.88
CFTRP13569 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC9.54□□□□□ -0.88
CFTRP13569 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CFTRP13569 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CFTRP13569 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CFTRP13569 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC9.54□□□□□ -0.88
CFTRP13569 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC9.54□□□□□ -0.88
CFTRP13569 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CFTRP13569 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC9.54□□□□□ -0.88
CFTRP13569 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
CFTRP13569 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
CFTRP13569 SNURFL-201ENST00000309296 343 ntBASIC9.53□□□□□ -0.88
CFTRP13569 SNORD8-201ENST00000363915 110 ntBASIC9.53□□□□□ -0.88
CFTRP13569 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC9.53□□□□□ -0.88
CFTRP13569 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CFTRP13569 USP9YP9-201ENST00000429406 715 ntBASIC9.53□□□□□ -0.88
CFTRP13569 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC9.53□□□□□ -0.88
CFTRP13569 CSNK1A1P3-201ENST00000504105 330 ntBASIC9.53□□□□□ -0.88
CFTRP13569 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC9.53□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms