Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC011352.2-201ENST00000514574 1016 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AC109635.6-201ENST00000525487 1113 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 DUX4L52-201ENST00000549363 777 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 MTCO1P40-201ENST00000574371 625 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 ISCA1P3-201ENST00000577104 373 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AL589863.1-201ENST00000595383 631 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AC091133.5-201ENST00000603088 301 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AC007255.2-201ENST00000604053 631 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AC073114.1-201ENST00000612027 490 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 MTND5P23-201ENST00000430812 1655 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 ZNF806-201ENST00000438300 1774 ntBASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
TMEM88BA6NKF7 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AC093536.2-201ENST00000565257 1406 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 PPIAP24-201ENST00000328558 471 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 RN7SKP174-201ENST00000363803 330 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 Y_RNA.192-201ENST00000363977 102 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 RNU4-7P-201ENST00000364758 141 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 PPIAP26-201ENST00000377951 522 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 U3.52-201ENST00000384034 216 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AC013404.1-201ENST00000413068 249 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AC066692.1-201ENST00000421721 457 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 RPS7P12-201ENST00000422385 582 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AC009784.1-201ENST00000426484 460 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 PNKDP1-201ENST00000435914 430 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AC234064.1-201ENST00000436312 247 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 SDHCP3-201ENST00000445371 506 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 XACT-201ENST00000468762 497 ntTSL 5 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 LSM3P4-201ENST00000502948 309 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AC108043.1-201ENST00000512696 574 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 ZNF519P4-201ENST00000514008 125 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 UBE2NP1-201ENST00000545592 458 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AL121766.1-201ENST00000547436 487 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AC044913.1-201ENST00000557200 430 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 CYCSP38-201ENST00000559840 322 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AC027807.1-201ENST00000559921 996 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 BNIP3P26-201ENST00000600827 554 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AL583832.1-201ENST00000603227 784 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AC096553.1-201ENST00000605169 829 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AC091965.5-201ENST00000624785 342 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AC119674.1-212ENST00000641155 993 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 AL096816.1-201ENST00000623300 2920 ntBASIC8.06□□□□□ -1.12
TMEM88BA6NKF7 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms