Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC005244.1-201ENST00000582566 339 ntBASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 AC027229.1-201ENST00000583887 253 ntBASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 AL391001.1-201ENST00000602747 715 ntBASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 AP001541.1-201ENST00000623322 1904 ntBASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TBC1D3FA6NER0 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 AC105749.1-201ENST00000631338 2008 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 KARSP1-201ENST00000451871 1752 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 AL022323.4-201ENST00000623980 13120 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 AC112243.1-201ENST00000623949 3851 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 TMSB4XP2-201ENST00000335179 210 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 MIR365B-201ENST00000362317 111 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 RNU6-40P-201ENST00000384254 107 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 AL031985.1-201ENST00000392713 418 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 HSFY1P1-201ENST00000423928 1178 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 AC104843.2-201ENST00000427666 297 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 RPL31P20-201ENST00000449593 360 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 RPL31P15-201ENST00000449770 338 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 RN7SL193P-201ENST00000491708 276 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 AC027338.1-201ENST00000514840 825 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 SNORD46.2-201ENST00000516021 102 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 WBP1LP3-201ENST00000523033 208 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 CKS1BP1-201ENST00000555221 240 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 AC012146.2-201ENST00000576545 416 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 BNIP3P35-201ENST00000604530 490 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 PPATP2-201ENST00000605635 508 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 AL136228.1-201ENST00000622221 319 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 AP003499.2-201ENST00000624100 483 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 AP000547.3-204ENST00000588548 2523 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 SNX18P3-202ENST00000565670 1750 ntBASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TBC1D3FA6NER0 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TBC1D3FA6NER0 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
TBC1D3FA6NER0 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
TBC1D3FA6NER0 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TBC1D3FA6NER0 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.1□□□□□ -1.43
TBC1D3FA6NER0 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.1□□□□□ -1.43
TBC1D3FA6NER0 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TBC1D3FA6NER0 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TBC1D3FA6NER0 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TBC1D3FA6NER0 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TBC1D3FA6NER0 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TBC1D3FA6NER0 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
TBC1D3FA6NER0 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.1□□□□□ -1.43
TBC1D3FA6NER0 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TBC1D3FA6NER0 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.1□□□□□ -1.43
TBC1D3FA6NER0 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.1□□□□□ -1.43
TBC1D3FA6NER0 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
TBC1D3FA6NER0 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TBC1D3FA6NER0 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TBC1D3FA6NER0 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TBC1D3FA6NER0 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.1□□□□□ -1.43
TBC1D3FA6NER0 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms