Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 IGHVII-44-2-201ENST00000517728 250 ntBASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 AL109766.1-201ENST00000555080 552 ntBASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 AC067959.1-201ENST00000604334 379 ntBASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 AL139041.1-201ENST00000605480 610 ntBASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 AL627230.1-201ENST00000613077 211 ntBASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 AL591926.8-201ENST00000616876 211 ntBASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 AC022726.2-201ENST00000634673 547 ntBASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RIMBP3Q9UFD9 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 RNA5SP171-201ENST00000391071 115 ntBASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 PPP2R2DP1-201ENST00000420526 637 ntBASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 TMEM183AP1-205ENST00000432739 290 ntBASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 RPL5P25-201ENST00000441148 775 ntBASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 AL359073.1-201ENST00000448036 403 ntBASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 AC074255.1-201ENST00000511259 501 ntBASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 AC008033.2-201ENST00000542626 177 ntBASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 AC126615.2-201ENST00000553003 515 ntBASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 MLECP1-201ENST00000615893 709 ntBASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 AC092692.1-201ENST00000623625 2595 ntBASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 AC013268.3-201ENST00000262716 2324 ntBASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 OR7E25P-202ENST00000641088 5937 ntBASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 AL122126.1-201ENST00000546905 1318 ntBASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 Z98755.1-201ENST00000407015 1384 ntBASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
RIMBP3Q9UFD9 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 MYL6P5-201ENST00000412707 459 ntBASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 HSPD1P12-201ENST00000429127 1069 ntBASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 AC112187.1-201ENST00000455837 479 ntBASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 IGKV2-23-201ENST00000518729 323 ntBASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 AL021368.3-201ENST00000607119 578 ntBASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 AC091932.2-201ENST00000623014 291 ntBASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 AC027348.2-201ENST00000624375 642 ntBASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 MIR6830-201ENST00000636015 70 ntBASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 THAP12P4-201ENST00000528321 2266 ntBASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 MFSD8-219ENST00000641228 2559 ntBASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 AC024255.1-201ENST00000614376 102 ntBASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 AC099494.2-201ENST00000623371 978 ntBASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC8.87□□□□□ -0.99
RIMBP3Q9UFD9 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms