Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SLITRK3-202ENST00000475390 4555 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
COL25A1Q9BXS0 STYK1-201ENST00000075503 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
COL25A1Q9BXS0 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC7.59□□□□□ -1.2
COL25A1Q9BXS0 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
COL25A1Q9BXS0 TMCC1P1-201ENST00000518897 1980 ntBASIC7.59□□□□□ -1.2
COL25A1Q9BXS0 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.2
COL25A1Q9BXS0 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
COL25A1Q9BXS0 AKNAD1-201ENST00000369994 2318 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 MAPK10-281ENST00000641170 3070 ntBASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 FAM193A-210ENST00000545951 3987 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 BTK-202ENST00000372880 2248 ntTSL 2 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 FKBP14-201ENST00000222803 4960 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 SAXO2-201ENST00000339465 3134 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 CEP95-203ENST00000556440 3139 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 RNU6-1090P-201ENST00000364065 94 ntBASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 RNA5SP238-201ENST00000365464 120 ntBASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 AC007068.1-201ENST00000396690 844 ntBASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 RN7SKP56-201ENST00000410513 331 ntBASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 RPL21P107-201ENST00000411449 460 ntBASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 RPS4XP4-201ENST00000443195 763 ntBASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 RPS27P5-201ENST00000444247 244 ntBASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 HMGB1P5-202ENST00000451497 985 ntBASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 AC017037.2-201ENST00000513850 890 ntBASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 AC093878.1-201ENST00000515630 432 ntBASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 MTCO3P15-201ENST00000526563 574 ntBASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 AC020661.2-201ENST00000560114 134 ntBASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 AL163952.1-202ENST00000569625 600 ntBASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 AL355598.1-201ENST00000604169 202 ntBASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 AC022467.1-201ENST00000614738 749 ntBASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 AC027807.2-201ENST00000616099 408 ntBASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 TTK-211ENST00000627129 240 ntTSL 5 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 ABBA01000935.2-201ENST00000637477 838 ntBASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 AC099063.3-201ENST00000642066 185 ntBASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 SLC30A8-202ENST00000456015 2520 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 MTMR2-204ENST00000409459 3420 ntTSL 5 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 COL21A1-201ENST00000244728 4339 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 AASS-202ENST00000393376 3233 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 AC061975.5-201ENST00000584928 1441 ntBASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 IPO7P2-201ENST00000451446 1750 ntBASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 SCYL3-203ENST00000367772 3090 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL25A1Q9BXS0 LINC01886-202ENST00000443205 1539 ntTSL 3 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 KIF23-202ENST00000352331 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 SH3D19-204ENST00000427414 2656 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 DPH3-202ENST00000383775 3052 ntTSL 2 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 RASA2-201ENST00000286364 5614 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 RPL12P13-201ENST00000310055 497 ntBASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 RNU6-1160P-201ENST00000384546 104 ntBASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 U3.38-201ENST00000408534 216 ntBASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 GAPDHP37-201ENST00000442317 968 ntBASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AC073109.1-201ENST00000445066 978 ntBASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AC073850.1-201ENST00000449243 255 ntBASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AC091982.1-202ENST00000473923 343 ntBASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AC091959.2-201ENST00000477363 321 ntBASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 RPS29P25-201ENST00000481709 171 ntBASIC7.57□□□□□ -1.2
COL25A1Q9BXS0 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms