Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC245047.1-201ENST00000433276 873 ntBASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 AC108751.3-201ENST00000461814 1020 ntBASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 ATP5G1P3-201ENST00000463301 410 ntBASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 AC027216.1-201ENST00000577726 685 ntBASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 ABI1P1-201ENST00000603375 1120 ntBASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 AL445670.1-201ENST00000618889 801 ntBASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 HOTTIP_3.1-201ENST00000619957 337 ntBASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 AL138955.1-201ENST00000622881 1040 ntBASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 AC090506.2-201ENST00000624521 419 ntBASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 SAGE3P-201ENST00000619800 1635 ntBASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 AC087565.3-202ENST00000642085 1603 ntBASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 LCOR-201ENST00000286067 4542 ntBASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SMC1BQ8NDV3 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 CASC19-255ENST00000641733 1385 ntBASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 AL445238.1-204ENST00000400311 463 ntBASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 AL121882.1-201ENST00000422893 417 ntBASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 AL512593.1-201ENST00000444758 779 ntBASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 TVP23BP2-201ENST00000455082 615 ntBASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 LDHBP2-201ENST00000456969 1005 ntBASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 RPS14P8-201ENST00000478778 369 ntBASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 RPS4XP23-201ENST00000487801 237 ntBASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 AC004453.1-201ENST00000487895 408 ntBASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 RN7SL184P-201ENST00000488308 297 ntBASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 AC022206.1-201ENST00000495947 347 ntBASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 AC055733.3-201ENST00000505214 523 ntBASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 AC005000.1-201ENST00000536192 288 ntBASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 HAUS8P1-201ENST00000549005 542 ntBASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 AC106785.3-201ENST00000564064 847 ntBASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 AC027281.1-201ENST00000574178 758 ntBASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 MTATP6P2-201ENST00000603319 678 ntBASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 AC009269.6-201ENST00000621778 588 ntBASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 DPY19L2P2-203ENST00000435536 1858 ntBASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 AL133243.4-201ENST00000623116 3109 ntBASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
SMC1BQ8NDV3 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
SMC1BQ8NDV3 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.46□□□□□ -1.21
SMC1BQ8NDV3 ABCA11P-202ENST00000504019 2110 ntBASIC7.46□□□□□ -1.21
SMC1BQ8NDV3 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
SMC1BQ8NDV3 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SMC1BQ8NDV3 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SMC1BQ8NDV3 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SMC1BQ8NDV3 LINC01963-201ENST00000562038 3148 ntBASIC7.46□□□□□ -1.21
SMC1BQ8NDV3 AL359976.1-201ENST00000418655 3528 ntBASIC7.46□□□□□ -1.21
SMC1BQ8NDV3 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms