Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 AL359091.1-201ENST00000449048 1734 ntBASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 AL133243.2-201ENST00000610331 1621 ntBASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 SNORA43.1-201ENST00000364863 140 ntBASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 RN7SKP187-201ENST00000365536 330 ntBASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 MIR1275-201ENST00000408770 80 ntBASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 RN7SKP151-201ENST00000410230 316 ntBASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 RNU4-64P-201ENST00000410795 131 ntBASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 SETP10-201ENST00000424368 814 ntBASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 AL354707.3-201ENST00000427308 331 ntBASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 AL390879.1-201ENST00000439143 386 ntBASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 HSPE1P22-201ENST00000456856 327 ntBASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 AC022336.1-201ENST00000475510 337 ntBASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 RN7SL741P-201ENST00000482473 289 ntBASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 HSD3BP3-201ENST00000514706 994 ntBASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 AC084121.1-201ENST00000533882 835 ntBASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 AL845552.1-201ENST00000556820 323 ntBASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 AC026826.3-201ENST00000561747 158 ntBASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 AC073488.6-201ENST00000632293 754 ntBASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.7□□□□□ -1.5
NUP54Q7Z3B4 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 HSPD1P8-201ENST00000400121 1658 ntBASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 AF287957.1-201ENST00000607368 1595 ntBASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 RBPJP2-201ENST00000618187 1444 ntBASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 AC093849.1-201ENST00000563631 2209 ntBASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 RNU1-65P-201ENST00000363919 148 ntBASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 RN7SKP108-201ENST00000411367 328 ntBASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 PSMD10P2-201ENST00000432890 672 ntBASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 AL392003.1-201ENST00000434394 243 ntBASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 RPSAP40-201ENST00000442343 891 ntBASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 RAD1P2-201ENST00000446414 663 ntBASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 AC026616.1-201ENST00000523157 525 ntBASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 MIR4502-201ENST00000580432 81 ntBASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 MIR4701-201ENST00000583094 63 ntBASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 AC027229.1-201ENST00000583887 253 ntBASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 AC092681.3-201ENST00000609463 678 ntBASIC5.69□□□□□ -1.5
NUP54Q7Z3B4 AC027575.3-201ENST00000583058 2747 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms