Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 OR7M1P-201ENST00000608946 533 ntBASIC8.89□□□□□ -0.99
RC3H1Q5TC82 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC8.89□□□□□ -0.99
RC3H1Q5TC82 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 CASC19-232ENST00000641480 1244 ntBASIC8.89□□□□□ -0.99
RC3H1Q5TC82 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 NF1P8-201ENST00000415351 1461 ntBASIC8.89□□□□□ -0.99
RC3H1Q5TC82 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AC087359.1-201ENST00000508335 1740 ntBASIC8.88□□□□□ -0.99
RC3H1Q5TC82 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 FAM3C2-201ENST00000312214 681 ntBASIC8.88□□□□□ -0.99
RC3H1Q5TC82 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 RNA5SP232-201ENST00000364144 119 ntBASIC8.88□□□□□ -0.99
RC3H1Q5TC82 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 ERHP2-201ENST00000402323 299 ntBASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AL590635.1-201ENST00000406314 586 ntBASIC8.88□□□□□ -0.99
RC3H1Q5TC82 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AC006960.1-201ENST00000419980 153 ntBASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 LSM3P3-201ENST00000436601 306 ntBASIC8.88□□□□□ -0.99
RC3H1Q5TC82 ATP6V1G1P4-201ENST00000438388 335 ntBASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 RPS10P18-201ENST00000442662 495 ntBASIC8.88□□□□□ -0.99
RC3H1Q5TC82 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AC097359.1-201ENST00000447946 463 ntBASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 SETP11-201ENST00000473027 690 ntBASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AC007537.1-201ENST00000539347 327 ntBASIC8.88□□□□□ -0.99
RC3H1Q5TC82 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 DUXAP1-201ENST00000556632 463 ntBASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AL049840.5-201ENST00000602827 552 ntBASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AL356986.1-201ENST00000604085 341 ntBASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AC090578.1-201ENST00000604955 591 ntBASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AC104184.1-201ENST00000607513 721 ntBASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AC019278.1-201ENST00000623516 479 ntBASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AC061999.1-201ENST00000624454 177 ntBASIC8.88□□□□□ -0.99
RC3H1Q5TC82 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AL121936.2-201ENST00000641935 662 ntBASIC8.88□□□□□ -0.99
RC3H1Q5TC82 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RC3H1Q5TC82 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 KARSP2-201ENST00000415696 1639 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 TRPM3-210ENST00000377111 4618 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 ELF2P3-201ENST00000445099 1506 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
RC3H1Q5TC82 FUNDC2P3-201ENST00000334716 533 ntBASIC8.87□□□□□ -0.99
RC3H1Q5TC82 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms