Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC38Q502W7 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC38Q502W7 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC38Q502W7 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC096921.2-201ENST00000561507 1916 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC38Q502W7 AC016745.2-201ENST00000608834 3443 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.42□□□□□ -1.38
CCDC38Q502W7 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC38Q502W7 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC38Q502W7 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC38Q502W7 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC38Q502W7 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CCDC38Q502W7 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC38Q502W7 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCDC38Q502W7 AL121835.1-201ENST00000404250 354 ntBASIC6.41□□□□□ -1.38
CCDC38Q502W7 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC38Q502W7 AC023141.6-201ENST00000429418 337 ntBASIC6.41□□□□□ -1.38
CCDC38Q502W7 ZNF965P-201ENST00000432501 817 ntBASIC6.41□□□□□ -1.38
CCDC38Q502W7 MTND2P21-201ENST00000436242 1042 ntBASIC6.41□□□□□ -1.38
CCDC38Q502W7 Z84478.1-201ENST00000438230 1219 ntBASIC6.41□□□□□ -1.38
CCDC38Q502W7 AP000949.1-201ENST00000438328 629 ntBASIC6.41□□□□□ -1.38
CCDC38Q502W7 PA2G4P1-201ENST00000442248 1197 ntBASIC6.41□□□□□ -1.38
CCDC38Q502W7 AL627224.1-201ENST00000448334 444 ntBASIC6.41□□□□□ -1.38
CCDC38Q502W7 AL034369.1-201ENST00000453808 477 ntBASIC6.41□□□□□ -1.38
CCDC38Q502W7 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC38Q502W7 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.41□□□□□ -1.38
CCDC38Q502W7 AP003049.1-201ENST00000529418 457 ntBASIC6.41□□□□□ -1.38
CCDC38Q502W7 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC38Q502W7 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC38Q502W7 DUX4L52-201ENST00000549363 777 ntBASIC6.41□□□□□ -1.38
CCDC38Q502W7 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC38Q502W7 AC027176.2-201ENST00000559166 746 ntBASIC6.41□□□□□ -1.38
CCDC38Q502W7 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC38Q502W7 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.41□□□□□ -1.38
CCDC38Q502W7 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.41□□□□□ -1.38
CCDC38Q502W7 U91328.4-201ENST00000608919 517 ntBASIC6.41□□□□□ -1.38
CCDC38Q502W7 AC105105.5-201ENST00000622635 1294 ntBASIC6.41□□□□□ -1.38
CCDC38Q502W7 FO681491.1-202ENST00000623392 737 ntBASIC6.41□□□□□ -1.38
CCDC38Q502W7 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC38Q502W7 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC38Q502W7 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC38Q502W7 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC38Q502W7 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC38Q502W7 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC38Q502W7 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC38Q502W7 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC38Q502W7 CCNT2P1-201ENST00000423082 1315 ntBASIC6.41□□□□□ -1.38
CCDC38Q502W7 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC38Q502W7 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC38Q502W7 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC38Q502W7 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC38Q502W7 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC38Q502W7 AP000473.2-201ENST00000602659 1537 ntBASIC6.4□□□□□ -1.38
CCDC38Q502W7 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC38Q502W7 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC38Q502W7 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.4□□□□□ -1.38
CCDC38Q502W7 RNA5SP105-201ENST00000391123 113 ntBASIC6.4□□□□□ -1.38
CCDC38Q502W7 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC38Q502W7 RN7SKP151-201ENST00000410230 316 ntBASIC6.4□□□□□ -1.38
CCDC38Q502W7 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC38Q502W7 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
CCDC38Q502W7 AC002127.1-201ENST00000421305 225 ntBASIC6.4□□□□□ -1.38
CCDC38Q502W7 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC38Q502W7 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC38Q502W7 AC016027.5-201ENST00000427227 210 ntBASIC6.4□□□□□ -1.38
CCDC38Q502W7 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC38Q502W7 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC38Q502W7 NPM1P23-201ENST00000440193 849 ntBASIC6.4□□□□□ -1.38
CCDC38Q502W7 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.4□□□□□ -1.38
CCDC38Q502W7 XKRY2-201ENST00000442362 1093 ntBASIC6.4□□□□□ -1.38
CCDC38Q502W7 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC38Q502W7 OR11I1P-201ENST00000486033 954 ntBASIC6.4□□□□□ -1.38
CCDC38Q502W7 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC38Q502W7 RNA5SP418-201ENST00000515951 117 ntBASIC6.4□□□□□ -1.38
CCDC38Q502W7 AC021269.1-201ENST00000526860 705 ntBASIC6.4□□□□□ -1.38
CCDC38Q502W7 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
CCDC38Q502W7 RPL3P13-201ENST00000550415 216 ntBASIC6.4□□□□□ -1.38
CCDC38Q502W7 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC38Q502W7 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC38Q502W7 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC38Q502W7 GLYATL1P2-202ENST00000588046 902 ntBASIC6.4□□□□□ -1.38
CCDC38Q502W7 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC38Q502W7 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC38Q502W7 AL158062.1-201ENST00000619632 745 ntBASIC6.4□□□□□ -1.38
CCDC38Q502W7 AC068213.1-201ENST00000625124 226 ntBASIC6.4□□□□□ -1.38
CCDC38Q502W7 AC003992.1-201ENST00000635364 557 ntBASIC6.4□□□□□ -1.38
CCDC38Q502W7 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC38Q502W7 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.4□□□□□ -1.39
CCDC38Q502W7 AC009501.3-201ENST00000605001 1352 ntBASIC6.4□□□□□ -1.39
CCDC38Q502W7 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.4□□□□□ -1.39
CCDC38Q502W7 AP001541.1-201ENST00000623322 1904 ntBASIC6.4□□□□□ -1.39
CCDC38Q502W7 AP001002.1-201ENST00000625148 1513 ntBASIC6.4□□□□□ -1.39
CCDC38Q502W7 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
CCDC38Q502W7 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC38Q502W7 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CCDC38Q502W7 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms