Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN18P56856 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN18P56856 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CLDN18P56856 IMMTP1-201ENST00000435590 2219 ntBASIC5.32□□□□□ -1.56
CLDN18P56856 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN18P56856 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CLDN18P56856 PARP4P2-201ENST00000446672 3326 ntBASIC5.32□□□□□ -1.56
CLDN18P56856 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN18P56856 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN18P56856 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN18P56856 THAP12P9-201ENST00000503971 2360 ntBASIC5.32□□□□□ -1.56
CLDN18P56856 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CLDN18P56856 RNA5SP500-201ENST00000364486 119 ntBASIC5.32□□□□□ -1.56
CLDN18P56856 RNA5SP122-201ENST00000384457 108 ntBASIC5.32□□□□□ -1.56
CLDN18P56856 AL360271.1-201ENST00000395679 510 ntBASIC5.32□□□□□ -1.56
CLDN18P56856 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CLDN18P56856 RPS4XP5-201ENST00000419038 768 ntBASIC5.32□□□□□ -1.56
CLDN18P56856 RPL34P27-201ENST00000428810 349 ntBASIC5.32□□□□□ -1.56
CLDN18P56856 RPL23AP19-201ENST00000436229 369 ntBASIC5.32□□□□□ -1.56
CLDN18P56856 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.32□□□□□ -1.56
CLDN18P56856 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.32□□□□□ -1.56
CLDN18P56856 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN18P56856 AC007998.1-201ENST00000474156 672 ntBASIC5.32□□□□□ -1.56
CLDN18P56856 RN7SL57P-201ENST00000493687 290 ntBASIC5.32□□□□□ -1.56
CLDN18P56856 PSMA2P2-201ENST00000504319 686 ntBASIC5.32□□□□□ -1.56
CLDN18P56856 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.32□□□□□ -1.56
CLDN18P56856 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.32□□□□□ -1.56
CLDN18P56856 RN7SKP248-201ENST00000516278 305 ntBASIC5.32□□□□□ -1.56
CLDN18P56856 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.32□□□□□ -1.56
CLDN18P56856 OR4A42P-201ENST00000531397 938 ntBASIC5.32□□□□□ -1.56
CLDN18P56856 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.32□□□□□ -1.56
CLDN18P56856 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.32□□□□□ -1.56
CLDN18P56856 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN18P56856 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.32□□□□□ -1.56
CLDN18P56856 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN18P56856 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN18P56856 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN18P56856 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.32□□□□□ -1.56
CLDN18P56856 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN18P56856 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN18P56856 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN18P56856 UGT2B24P-201ENST00000514441 1597 ntBASIC5.32□□□□□ -1.56
CLDN18P56856 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN18P56856 AP001284.1-201ENST00000528393 2118 ntBASIC5.32□□□□□ -1.56
CLDN18P56856 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN18P56856 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN18P56856 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN18P56856 PDZK1P1-202ENST00000425209 1350 ntBASIC5.31□□□□□ -1.56
CLDN18P56856 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN18P56856 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CLDN18P56856 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN18P56856 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CLDN18P56856 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN18P56856 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN18P56856 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN18P56856 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CLDN18P56856 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CLDN18P56856 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN18P56856 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.31□□□□□ -1.56
CLDN18P56856 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN18P56856 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN18P56856 AC245060.4-201ENST00000413293 1121 ntBASIC5.31□□□□□ -1.56
CLDN18P56856 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN18P56856 RPS12P17-201ENST00000438591 377 ntBASIC5.31□□□□□ -1.56
CLDN18P56856 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN18P56856 CUBNP2-201ENST00000443534 1139 ntBASIC5.31□□□□□ -1.56
CLDN18P56856 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN18P56856 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN18P56856 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN18P56856 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN18P56856 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN18P56856 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN18P56856 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN18P56856 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN18P56856 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
CLDN18P56856 MIR3614-201ENST00000581261 86 ntBASIC5.31□□□□□ -1.56
CLDN18P56856 AC008521.2-201ENST00000591021 259 ntBASIC5.31□□□□□ -1.56
CLDN18P56856 AC145423.1-201ENST00000605712 336 ntBASIC5.31□□□□□ -1.56
CLDN18P56856 AP005431.1-201ENST00000618479 319 ntBASIC5.31□□□□□ -1.56
CLDN18P56856 OR8G3P-202ENST00000641572 1255 ntBASIC5.31□□□□□ -1.56
CLDN18P56856 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN18P56856 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
CLDN18P56856 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CLDN18P56856 AC125336.1-201ENST00000508893 2827 ntBASIC5.31□□□□□ -1.56
CLDN18P56856 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN18P56856 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CLDN18P56856 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN18P56856 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN18P56856 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN18P56856 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN18P56856 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN18P56856 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CLDN18P56856 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN18P56856 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN18P56856 NLRP3P1-201ENST00000622303 1785 ntBASIC5.3□□□□□ -1.56
CLDN18P56856 WDR95P-201ENST00000425638 1542 ntBASIC5.3□□□□□ -1.56
CLDN18P56856 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CLDN18P56856 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CLDN18P56856 RNA5SP284-201ENST00000384547 118 ntBASIC5.3□□□□□ -1.56
CLDN18P56856 AL031985.1-201ENST00000392713 418 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms