Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN6P56747 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN6P56747 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.71□□□□□ -1.5
CLDN6P56747 MRE11P1-201ENST00000464884 2127 ntBASIC5.71□□□□□ -1.5
CLDN6P56747 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CLDN6P56747 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
CLDN6P56747 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN6P56747 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN6P56747 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CLDN6P56747 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN6P56747 AC139426.3-201ENST00000605648 2059 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 AC079753.1-201ENST00000623243 3868 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 AL590763.1-201ENST00000398297 1545 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN6P56747 MRRFP1-201ENST00000435941 1675 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN6P56747 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN6P56747 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.7□□□□□ -1.5
CLDN6P56747 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN6P56747 GAPDHP24-201ENST00000328713 983 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN6P56747 SNORA70H-201ENST00000383910 135 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 SNORA70J-201ENST00000384182 135 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 AP003170.5-201ENST00000397185 335 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 RN7SKP29-201ENST00000410957 272 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 Z84478.1-201ENST00000438230 1219 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN6P56747 AL606490.1-201ENST00000452266 765 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 AC011225.1-201ENST00000457751 369 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 RPL35AP19-201ENST00000469425 329 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN6P56747 RN7SL727P-201ENST00000482164 296 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 RN7SL547P-201ENST00000490793 290 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.7□□□□□ -1.5
CLDN6P56747 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.7□□□□□ -1.5
CLDN6P56747 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN6P56747 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.7□□□□□ -1.5
CLDN6P56747 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.7□□□□□ -1.5
CLDN6P56747 EIF4A2P5-201ENST00000529914 499 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.7□□□□□ -1.5
CLDN6P56747 MIR3189-201ENST00000578735 73 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN6P56747 IMMP1LP3-201ENST00000604197 224 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN6P56747 AC008115.3-201ENST00000614874 549 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 AC004808.2-201ENST00000627965 773 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.7□□□□□ -1.5
CLDN6P56747 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN6P56747 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.7□□□□□ -1.5
CLDN6P56747 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN6P56747 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN6P56747 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN6P56747 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN6P56747 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN6P56747 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN6P56747 AC006511.3-201ENST00000624929 1783 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 SRRM1P3-201ENST00000426911 2678 ntBASIC5.7□□□□□ -1.5
CLDN6P56747 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CLDN6P56747 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.7□□□□□ -1.5
CLDN6P56747 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN6P56747 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN6P56747 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN6P56747 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN6P56747 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN6P56747 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN6P56747 HDAC1P2-201ENST00000453661 1398 ntBASIC5.69□□□□□ -1.5
CLDN6P56747 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN6P56747 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CLDN6P56747 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
CLDN6P56747 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN6P56747 AC007842.1-201ENST00000597336 2039 ntBASIC5.69□□□□□ -1.5
CLDN6P56747 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN6P56747 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN6P56747 AL669831.5-218ENST00000591702 1873 ntBASIC5.69□□□□□ -1.5
CLDN6P56747 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
CLDN6P56747 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN6P56747 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN6P56747 AL451142.1-201ENST00000375867 775 ntBASIC5.69□□□□□ -1.5
CLDN6P56747 AP000534.2-201ENST00000412729 568 ntBASIC5.69□□□□□ -1.5
CLDN6P56747 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN6P56747 BMS1P17-202ENST00000416720 316 ntBASIC5.69□□□□□ -1.5
CLDN6P56747 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN6P56747 TNPO1P1-201ENST00000423641 1138 ntBASIC5.69□□□□□ -1.5
CLDN6P56747 AC006455.6-201ENST00000426192 893 ntBASIC5.69□□□□□ -1.5
CLDN6P56747 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN6P56747 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN6P56747 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN6P56747 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN6P56747 LRRC37A14P-201ENST00000452297 462 ntBASIC5.69□□□□□ -1.5
CLDN6P56747 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN6P56747 AC083795.1-201ENST00000491760 320 ntBASIC5.69□□□□□ -1.5
CLDN6P56747 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN6P56747 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN6P56747 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN6P56747 IGHV1-14-201ENST00000523391 241 ntBASIC5.69□□□□□ -1.5
CLDN6P56747 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN6P56747 DPPA2P4-201ENST00000563717 878 ntBASIC5.69□□□□□ -1.5
CLDN6P56747 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN6P56747 AL445222.1-201ENST00000607259 628 ntBASIC5.69□□□□□ -1.5
CLDN6P56747 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms