Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SUMO3P55854 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SUMO3P55854 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SUMO3P55854 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SUMO3P55854 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SUMO3P55854 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.9□□□□□ -1.46
SUMO3P55854 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.9□□□□□ -1.46
SUMO3P55854 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.9□□□□□ -1.46
SUMO3P55854 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SUMO3P55854 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SUMO3P55854 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.9□□□□□ -1.46
SUMO3P55854 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SUMO3P55854 AC130360.2-201ENST00000533477 1556 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SUMO3P55854 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SUMO3P55854 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SUMO3P55854 RNU1-84P-201ENST00000365447 164 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
SUMO3P55854 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SUMO3P55854 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SUMO3P55854 RN7SKP221-201ENST00000410420 301 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 UBTFL2-201ENST00000411859 1191 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.9□□□□□ -1.46
SUMO3P55854 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
SUMO3P55854 SETP9-201ENST00000423837 832 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 AC083862.1-201ENST00000427378 1242 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 RPEP4-201ENST00000437636 602 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 MTCO1P53-201ENST00000441633 699 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 AL031681.1-201ENST00000443304 400 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.9□□□□□ -1.46
SUMO3P55854 AC092685.1-201ENST00000447960 1243 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 RBMY2TP-201ENST00000451162 947 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.9□□□□□ -1.46
SUMO3P55854 AC008280.2-201ENST00000455473 307 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 AC074386.1-206ENST00000487102 761 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 AC073610.1-201ENST00000489971 396 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 AC022206.1-201ENST00000495947 347 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 AC026414.1-201ENST00000504046 698 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 AC114322.1-201ENST00000506771 926 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.9□□□□□ -1.46
SUMO3P55854 AC106800.3-201ENST00000511389 308 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 GAPDHP71-201ENST00000511530 1003 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.9□□□□□ -1.46
SUMO3P55854 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.9□□□□□ -1.46
SUMO3P55854 AC091163.3-201ENST00000518269 1144 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 IGKV1D-22-201ENST00000518953 324 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SUMO3P55854 KCTD9P4-201ENST00000526766 1166 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.9□□□□□ -1.46
SUMO3P55854 AC068305.2-201ENST00000550567 1205 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.9□□□□□ -1.46
SUMO3P55854 AC037479.1-201ENST00000558361 625 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 AC068313.1-201ENST00000604028 1008 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 AL049844.2-201ENST00000604280 628 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 AL589743.6-201ENST00000611025 117 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SUMO3P55854 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.9□□□□□ -1.46
SUMO3P55854 AC010435.1-201ENST00000623353 1177 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 OR8G3P-202ENST00000641572 1255 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SUMO3P55854 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SUMO3P55854 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.9□□□□□ -1.47
SUMO3P55854 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SUMO3P55854 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.9□□□□□ -1.47
SUMO3P55854 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SUMO3P55854 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
SUMO3P55854 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.9□□□□□ -1.47
SUMO3P55854 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SUMO3P55854 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SUMO3P55854 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SUMO3P55854 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
SUMO3P55854 CUBNP3-201ENST00000457461 1784 ntBASIC5.9□□□□□ -1.47
SUMO3P55854 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
SUMO3P55854 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.9□□□□□ -1.47
SUMO3P55854 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.9□□□□□ -1.47
SUMO3P55854 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.47
SUMO3P55854 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SUMO3P55854 AL391261.1-201ENST00000555712 1479 ntBASIC5.9□□□□□ -1.47
SUMO3P55854 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
SUMO3P55854 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.89□□□□□ -1.47
SUMO3P55854 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SUMO3P55854 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SUMO3P55854 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SUMO3P55854 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC5.89□□□□□ -1.47
SUMO3P55854 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SUMO3P55854 AL121950.1-201ENST00000624993 2077 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SUMO3P55854 SAGE3P-201ENST00000619800 1635 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.89□□□□□ -1.47
SUMO3P55854 AC022905.1-201ENST00000503430 3048 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SUMO3P55854 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.89□□□□□ -1.47
SUMO3P55854 MRPS21P5-201ENST00000417885 231 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.89□□□□□ -1.47
SUMO3P55854 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SUMO3P55854 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SUMO3P55854 AC093422.3-201ENST00000428506 305 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 FO393419.3-201ENST00000428741 282 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 MTND2P2-201ENST00000434633 945 ntBASIC5.89□□□□□ -1.47
SUMO3P55854 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms