Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC9.98□□□□□ -0.81
SMARCA4P51532 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC9.97□□□□□ -0.81
SMARCA4P51532 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
SMARCA4P51532 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SMARCA4P51532 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SMARCA4P51532 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
SMARCA4P51532 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC9.97□□□□□ -0.81
SMARCA4P51532 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC9.97□□□□□ -0.81
SMARCA4P51532 AL133388.1-201ENST00000404509 287 ntBASIC9.97□□□□□ -0.81
SMARCA4P51532 RNA5SP487-201ENST00000410186 122 ntBASIC9.97□□□□□ -0.81
SMARCA4P51532 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC9.97□□□□□ -0.81
SMARCA4P51532 RPS3AP53-201ENST00000454716 778 ntBASIC9.97□□□□□ -0.81
SMARCA4P51532 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC9.97□□□□□ -0.81
SMARCA4P51532 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC9.97□□□□□ -0.81
SMARCA4P51532 IGHVIII-76-1-201ENST00000523776 286 ntBASIC9.97□□□□□ -0.81
SMARCA4P51532 AF230666.2-201ENST00000602328 725 ntBASIC9.97□□□□□ -0.81
SMARCA4P51532 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
SMARCA4P51532 CASC19-281ENST00000642118 1554 ntBASIC9.97□□□□□ -0.81
SMARCA4P51532 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SMARCA4P51532 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SMARCA4P51532 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC9.97□□□□□ -0.81
SMARCA4P51532 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC9.97□□□□□ -0.81
SMARCA4P51532 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SMARCA4P51532 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SMARCA4P51532 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SMARCA4P51532 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
SMARCA4P51532 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SMARCA4P51532 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SMARCA4P51532 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC9.97□□□□□ -0.81
SMARCA4P51532 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
SMARCA4P51532 RNA5SP91-201ENST00000390902 119 ntBASIC9.96□□□□□ -0.81
SMARCA4P51532 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC9.96□□□□□ -0.81
SMARCA4P51532 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC9.96□□□□□ -0.81
SMARCA4P51532 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC9.96□□□□□ -0.81
SMARCA4P51532 TRY2P-201ENST00000448860 689 ntBASIC9.96□□□□□ -0.81
SMARCA4P51532 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC9.96□□□□□ -0.81
SMARCA4P51532 MIR4697-201ENST00000582977 78 ntBASIC9.96□□□□□ -0.81
SMARCA4P51532 AC004836.1-201ENST00000623032 634 ntBASIC9.96□□□□□ -0.81
SMARCA4P51532 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC9.96□□□□□ -0.81
SMARCA4P51532 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
SMARCA4P51532 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC9.96□□□□□ -0.81
SMARCA4P51532 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
SMARCA4P51532 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC9.96□□□□□ -0.81
SMARCA4P51532 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
SMARCA4P51532 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
SMARCA4P51532 AL162456.1-201ENST00000634535 2006 ntBASIC9.96□□□□□ -0.82
SMARCA4P51532 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SMARCA4P51532 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
SMARCA4P51532 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SMARCA4P51532 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC9.96□□□□□ -0.82
SMARCA4P51532 EIF2S2P3-201ENST00000428356 999 ntBASIC9.96□□□□□ -0.82
SMARCA4P51532 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC9.96□□□□□ -0.82
SMARCA4P51532 GYG1P1-201ENST00000460864 698 ntBASIC9.96□□□□□ -0.82
SMARCA4P51532 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC9.96□□□□□ -0.82
SMARCA4P51532 BRD9P1-201ENST00000529855 560 ntBASIC9.96□□□□□ -0.82
SMARCA4P51532 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC9.96□□□□□ -0.82
SMARCA4P51532 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC9.96□□□□□ -0.82
SMARCA4P51532 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC9.96□□□□□ -0.82
SMARCA4P51532 AC095055.1-201ENST00000603472 1113 ntBASIC9.96□□□□□ -0.82
SMARCA4P51532 AC009831.5-201ENST00000624000 3189 ntBASIC9.96□□□□□ -0.82
SMARCA4P51532 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SMARCA4P51532 OLMALINC-203ENST00000641087 3779 ntBASIC9.96□□□□□ -0.82
SMARCA4P51532 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
SMARCA4P51532 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SMARCA4P51532 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SMARCA4P51532 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SMARCA4P51532 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SMARCA4P51532 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SMARCA4P51532 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC9.95□□□□□ -0.82
SMARCA4P51532 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SMARCA4P51532 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SMARCA4P51532 SNURFL-201ENST00000309296 343 ntBASIC9.95□□□□□ -0.82
SMARCA4P51532 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SMARCA4P51532 AL035419.1-201ENST00000397037 564 ntBASIC9.95□□□□□ -0.82
SMARCA4P51532 RN7SKP126-201ENST00000411143 300 ntBASIC9.95□□□□□ -0.82
SMARCA4P51532 AC068138.1-201ENST00000412635 217 ntBASIC9.95□□□□□ -0.82
SMARCA4P51532 TRBV5-2-201ENST00000489095 273 ntBASIC9.95□□□□□ -0.82
SMARCA4P51532 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SMARCA4P51532 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC9.95□□□□□ -0.82
SMARCA4P51532 HMGB1P44-201ENST00000508597 572 ntBASIC9.95□□□□□ -0.82
SMARCA4P51532 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC9.95□□□□□ -0.82
SMARCA4P51532 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SMARCA4P51532 IARS-213ENST00000627121 4587 ntTSL 5 BASIC9.95□□□□□ -0.82
SMARCA4P51532 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC9.95□□□□□ -0.82
SMARCA4P51532 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC9.95□□□□□ -0.82
SMARCA4P51532 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC9.95□□□□□ -0.82
SMARCA4P51532 OR9K1P-202ENST00000641111 3217 ntBASIC9.94□□□□□ -0.82
SMARCA4P51532 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SMARCA4P51532 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
SMARCA4P51532 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SMARCA4P51532 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC9.94□□□□□ -0.82
SMARCA4P51532 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC9.94□□□□□ -0.82
SMARCA4P51532 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SMARCA4P51532 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC9.94□□□□□ -0.82
SMARCA4P51532 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
SMARCA4P51532 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SMARCA4P51532 RNU1-146P-201ENST00000364015 165 ntBASIC9.94□□□□□ -0.82
SMARCA4P51532 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
SMARCA4P51532 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC9.94□□□□□ -0.82
SMARCA4P51532 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms