Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMARCA2P51531 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMARCA2P51531 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
SMARCA2P51531 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMARCA2P51531 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SMARCA2P51531 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMARCA2P51531 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
SMARCA2P51531 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMARCA2P51531 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMARCA2P51531 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
SMARCA2P51531 RNU4-4P-201ENST00000364588 130 ntBASIC10.05□□□□□ -0.8
SMARCA2P51531 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
SMARCA2P51531 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC10.05□□□□□ -0.8
SMARCA2P51531 AC092324.1-201ENST00000468671 324 ntBASIC10.05□□□□□ -0.8
SMARCA2P51531 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC10.05□□□□□ -0.8
SMARCA2P51531 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SMARCA2P51531 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
SMARCA2P51531 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC10.05□□□□□ -0.8
SMARCA2P51531 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMARCA2P51531 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMARCA2P51531 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC10.05□□□□□ -0.8
SMARCA2P51531 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SMARCA2P51531 AC008957.3-201ENST00000624112 2242 ntBASIC10.04□□□□□ -0.8
SMARCA2P51531 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMARCA2P51531 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC10.04□□□□□ -0.8
SMARCA2P51531 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SMARCA2P51531 AC011493.1-201ENST00000596753 1632 ntBASIC10.04□□□□□ -0.8
SMARCA2P51531 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMARCA2P51531 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMARCA2P51531 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMARCA2P51531 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC10.04□□□□□ -0.8
SMARCA2P51531 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SMARCA2P51531 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMARCA2P51531 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMARCA2P51531 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC10.04□□□□□ -0.8
SMARCA2P51531 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMARCA2P51531 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMARCA2P51531 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
SMARCA2P51531 GNAS-202ENST00000306090 477 ntTSL 5 BASIC10.04□□□□□ -0.8
SMARCA2P51531 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMARCA2P51531 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC10.04□□□□□ -0.8
SMARCA2P51531 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC10.04□□□□□ -0.8
SMARCA2P51531 AL049779.3-201ENST00000557141 606 ntBASIC10.04□□□□□ -0.8
SMARCA2P51531 AC087385.3-201ENST00000620477 187 ntBASIC10.04□□□□□ -0.8
SMARCA2P51531 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
SMARCA2P51531 TEX41-254ENST00000626394 423 ntTSL 5 BASIC10.04□□□□□ -0.8
SMARCA2P51531 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMARCA2P51531 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMARCA2P51531 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC10.04□□□□□ -0.8
SMARCA2P51531 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC10.04□□□□□ -0.8
SMARCA2P51531 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMARCA2P51531 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SMARCA2P51531 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SMARCA2P51531 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMARCA2P51531 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC10.03□□□□□ -0.8
SMARCA2P51531 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC10.03□□□□□ -0.8
SMARCA2P51531 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMARCA2P51531 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMARCA2P51531 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMARCA2P51531 SNORA17.1-201ENST00000362945 126 ntBASIC10.03□□□□□ -0.8
SMARCA2P51531 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
SMARCA2P51531 AL035419.1-201ENST00000397037 564 ntBASIC10.03□□□□□ -0.8
SMARCA2P51531 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC10.03□□□□□ -0.8
SMARCA2P51531 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC10.03□□□□□ -0.8
SMARCA2P51531 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC10.03□□□□□ -0.8
SMARCA2P51531 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC10.03□□□□□ -0.8
SMARCA2P51531 MAL2-208ENST00000523307 556 ntTSL 4 BASIC10.03□□□□□ -0.8
SMARCA2P51531 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC10.03□□□□□ -0.8
SMARCA2P51531 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC10.03□□□□□ -0.8
SMARCA2P51531 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC10.03□□□□□ -0.8
SMARCA2P51531 CASC22-202ENST00000628396 802 ntTSL 5 BASIC10.03□□□□□ -0.8
SMARCA2P51531 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMARCA2P51531 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMARCA2P51531 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMARCA2P51531 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC10.03□□□□□ -0.8
SMARCA2P51531 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SMARCA2P51531 AL121768.1-201ENST00000613917 2544 ntBASIC10.03□□□□□ -0.8
SMARCA2P51531 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC10.03□□□□□ -0.8
SMARCA2P51531 AC092821.2-201ENST00000545710 2042 ntBASIC10.03□□□□□ -0.8
SMARCA2P51531 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SMARCA2P51531 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SMARCA2P51531 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SMARCA2P51531 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
SMARCA2P51531 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SMARCA2P51531 HNRNPA3P4-201ENST00000427514 803 ntBASIC10.02□□□□□ -0.81
SMARCA2P51531 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC10.02□□□□□ -0.81
SMARCA2P51531 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SMARCA2P51531 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC10.02□□□□□ -0.81
SMARCA2P51531 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC10.02□□□□□ -0.81
SMARCA2P51531 IGLV3-24-201ENST00000517477 197 ntBASIC10.02□□□□□ -0.81
SMARCA2P51531 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC10.02□□□□□ -0.81
SMARCA2P51531 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC10.02□□□□□ -0.81
SMARCA2P51531 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC10.02□□□□□ -0.81
SMARCA2P51531 AP000346.3-201ENST00000622821 210 ntBASIC10.02□□□□□ -0.81
SMARCA2P51531 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC10.02□□□□□ -0.81
SMARCA2P51531 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
SMARCA2P51531 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC10.02□□□□□ -0.81
SMARCA2P51531 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SMARCA2P51531 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC10.02□□□□□ -0.81
SMARCA2P51531 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC10.02□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms