Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHKAP35790 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CHKAP35790 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHKAP35790 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHKAP35790 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHKAP35790 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHKAP35790 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHKAP35790 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.53□□□□□ -1.36
CHKAP35790 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHKAP35790 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHKAP35790 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHKAP35790 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
CHKAP35790 IFIT1P1-201ENST00000400497 1449 ntBASIC6.52□□□□□ -1.37
CHKAP35790 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHKAP35790 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHKAP35790 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHKAP35790 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CHKAP35790 RNA5SP433-201ENST00000364491 114 ntBASIC6.52□□□□□ -1.37
CHKAP35790 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.52□□□□□ -1.37
CHKAP35790 AL121977.1-201ENST00000401636 979 ntBASIC6.52□□□□□ -1.37
CHKAP35790 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.52□□□□□ -1.37
CHKAP35790 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.52□□□□□ -1.37
CHKAP35790 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.52□□□□□ -1.37
CHKAP35790 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHKAP35790 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.52□□□□□ -1.37
CHKAP35790 AL353718.1-201ENST00000451028 517 ntBASIC6.52□□□□□ -1.37
CHKAP35790 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.52□□□□□ -1.37
CHKAP35790 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.52□□□□□ -1.37
CHKAP35790 AC015864.1-201ENST00000496512 544 ntBASIC6.52□□□□□ -1.37
CHKAP35790 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.52□□□□□ -1.37
CHKAP35790 PSMA2P2-201ENST00000504319 686 ntBASIC6.52□□□□□ -1.37
CHKAP35790 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.52□□□□□ -1.37
CHKAP35790 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.52□□□□□ -1.37
CHKAP35790 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.52□□□□□ -1.37
CHKAP35790 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.52□□□□□ -1.37
CHKAP35790 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.52□□□□□ -1.37
CHKAP35790 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.52□□□□□ -1.37
CHKAP35790 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.52□□□□□ -1.37
CHKAP35790 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHKAP35790 AC092474.3-201ENST00000603022 568 ntBASIC6.52□□□□□ -1.37
CHKAP35790 RPL12P48-201ENST00000605620 304 ntBASIC6.52□□□□□ -1.37
CHKAP35790 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.52□□□□□ -1.37
CHKAP35790 MIR6071-201ENST00000616741 78 ntBASIC6.52□□□□□ -1.37
CHKAP35790 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
CHKAP35790 MIR6778-201ENST00000617912 73 ntBASIC6.52□□□□□ -1.37
CHKAP35790 AL158062.1-201ENST00000619632 745 ntBASIC6.52□□□□□ -1.37
CHKAP35790 AC019080.5-201ENST00000624891 757 ntBASIC6.52□□□□□ -1.37
CHKAP35790 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.52□□□□□ -1.37
CHKAP35790 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.52□□□□□ -1.37
CHKAP35790 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.52□□□□□ -1.37
CHKAP35790 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.52□□□□□ -1.37
CHKAP35790 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHKAP35790 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHKAP35790 CDC27P2-201ENST00000425026 1922 ntBASIC6.52□□□□□ -1.37
CHKAP35790 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CHKAP35790 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.52□□□□□ -1.37
CHKAP35790 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.52□□□□□ -1.37
CHKAP35790 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHKAP35790 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHKAP35790 AL121768.1-201ENST00000613917 2544 ntBASIC6.51□□□□□ -1.37
CHKAP35790 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.51□□□□□ -1.37
CHKAP35790 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHKAP35790 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.51□□□□□ -1.37
CHKAP35790 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHKAP35790 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHKAP35790 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHKAP35790 AC092692.1-201ENST00000623625 2595 ntBASIC6.51□□□□□ -1.37
CHKAP35790 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CHKAP35790 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
CHKAP35790 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHKAP35790 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CHKAP35790 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CHKAP35790 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.51□□□□□ -1.37
CHKAP35790 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.51□□□□□ -1.37
CHKAP35790 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.51□□□□□ -1.37
CHKAP35790 AL590004.3-202ENST00000445883 451 ntBASIC6.51□□□□□ -1.37
CHKAP35790 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.51□□□□□ -1.37
CHKAP35790 MORF4-201ENST00000447135 971 ntBASIC6.51□□□□□ -1.37
CHKAP35790 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHKAP35790 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.51□□□□□ -1.37
CHKAP35790 RPSAP39-201ENST00000467439 883 ntBASIC6.51□□□□□ -1.37
CHKAP35790 AP002884.1-201ENST00000479691 655 ntBASIC6.51□□□□□ -1.37
CHKAP35790 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.51□□□□□ -1.37
CHKAP35790 OR11I1P-201ENST00000486033 954 ntBASIC6.51□□□□□ -1.37
CHKAP35790 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC6.51□□□□□ -1.37
CHKAP35790 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.51□□□□□ -1.37
CHKAP35790 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CHKAP35790 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.51□□□□□ -1.37
CHKAP35790 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.51□□□□□ -1.37
CHKAP35790 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.51□□□□□ -1.37
CHKAP35790 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.51□□□□□ -1.37
CHKAP35790 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.51□□□□□ -1.37
CHKAP35790 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.51□□□□□ -1.37
CHKAP35790 AP001437.1-201ENST00000608783 456 ntBASIC6.51□□□□□ -1.37
CHKAP35790 AL080312.2-201ENST00000613001 630 ntBASIC6.51□□□□□ -1.37
CHKAP35790 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.51□□□□□ -1.37
CHKAP35790 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHKAP35790 AC079753.1-201ENST00000623243 3868 ntBASIC6.51□□□□□ -1.37
CHKAP35790 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHKAP35790 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms