Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 snoU13.1-201ENST00000459157 104 ntBASIC2.45□□□□□ -2.02
USH2AO75445 AC119751.5-201ENST00000514077 770 ntBASIC2.45□□□□□ -2.02
USH2AO75445 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 AC092375.1-201ENST00000550410 637 ntBASIC2.45□□□□□ -2.02
USH2AO75445 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC2.45□□□□□ -2.02
USH2AO75445 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 AL356752.1-201ENST00000615844 593 ntBASIC2.45□□□□□ -2.02
USH2AO75445 CTSC-203ENST00000524463 6125 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 DYNC1I2P1-201ENST00000435916 1838 ntBASIC2.45□□□□□ -2.02
USH2AO75445 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC2.45□□□□□ -2.02
USH2AO75445 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC2.45□□□□□ -2.02
USH2AO75445 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
USH2AO75445 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
USH2AO75445 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 U3.35-201ENST00000408405 208 ntBASIC2.45□□□□□ -2.02
USH2AO75445 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.45□□□□□ -2.02
USH2AO75445 GJA6P-201ENST00000415117 1042 ntBASIC2.45□□□□□ -2.02
USH2AO75445 AC105399.1-202ENST00000447303 205 ntBASIC2.45□□□□□ -2.02
USH2AO75445 RPSAP51-201ENST00000497462 645 ntBASIC2.45□□□□□ -2.02
USH2AO75445 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC2.45□□□□□ -2.02
USH2AO75445 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USH2AO75445 AC145423.1-201ENST00000605712 336 ntBASIC2.45□□□□□ -2.02
USH2AO75445 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC2.45□□□□□ -2.02
USH2AO75445 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 TTC28-201ENST00000397906 11795 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 OR4D9-203ENST00000641962 6123 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
USH2AO75445 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
USH2AO75445 TNC-201ENST00000341037 6786 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC2.44□□□□□ -2.02
USH2AO75445 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 AC100757.1-201ENST00000616872 1835 ntBASIC2.44□□□□□ -2.02
USH2AO75445 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC2.44□□□□□ -2.02
USH2AO75445 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.44□□□□□ -2.02
USH2AO75445 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC2.44□□□□□ -2.02
USH2AO75445 HMGB1P44-201ENST00000508597 572 ntBASIC2.44□□□□□ -2.02
USH2AO75445 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC2.44□□□□□ -2.02
USH2AO75445 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC2.44□□□□□ -2.02
USH2AO75445 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC2.44□□□□□ -2.02
USH2AO75445 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 ENPEP-201ENST00000265162 6943 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 AFF2-205ENST00000370460 13746 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC2.44□□□□□ -2.02
USH2AO75445 TRPM7-207ENST00000560955 7218 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
USH2AO75445 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 CPS1-IT1-201ENST00000628368 2306 ntBASIC2.44□□□□□ -2.02
USH2AO75445 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
USH2AO75445 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 RNU1-149P-201ENST00000390870 161 ntBASIC2.44□□□□□ -2.02
USH2AO75445 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.44□□□□□ -2.02
USH2AO75445 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC2.44□□□□□ -2.02
USH2AO75445 RN7SKP147-201ENST00000517154 244 ntBASIC2.44□□□□□ -2.02
USH2AO75445 RNU1-45P-201ENST00000517191 141 ntBASIC2.44□□□□□ -2.02
USH2AO75445 RPA2P3-201ENST00000533268 770 ntBASIC2.44□□□□□ -2.02
USH2AO75445 YWHABP2-201ENST00000540201 713 ntBASIC2.44□□□□□ -2.02
USH2AO75445 RN7SL339P-201ENST00000580597 296 ntBASIC2.44□□□□□ -2.02
USH2AO75445 AL513548.2-201ENST00000602994 1207 ntBASIC2.44□□□□□ -2.02
USH2AO75445 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC2.44□□□□□ -2.02
USH2AO75445 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
USH2AO75445 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 AR-201ENST00000374690 10652 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USH2AO75445 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms