Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RNF40O75150 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RNF40O75150 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RNF40O75150 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC8.61□□□□□ -1.03
RNF40O75150 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RNF40O75150 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RNF40O75150 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RNF40O75150 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RNF40O75150 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RNF40O75150 AC009044.1-201ENST00000624577 1798 ntBASIC8.61□□□□□ -1.03
RNF40O75150 AC022306.1-201ENST00000560489 1562 ntBASIC8.61□□□□□ -1.03
RNF40O75150 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
RNF40O75150 AC004148.2-201ENST00000575890 1938 ntTSL 5 BASIC8.6□□□□□ -1.03
RNF40O75150 GLRA3-202ENST00000340217 3065 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RNF40O75150 TTC33-205ENST00000636106 2252 ntTSL 5 BASIC8.6□□□□□ -1.03
RNF40O75150 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC8.6□□□□□ -1.03
RNF40O75150 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC8.6□□□□□ -1.03
RNF40O75150 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC8.6□□□□□ -1.03
RNF40O75150 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC8.6□□□□□ -1.03
RNF40O75150 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
RNF40O75150 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RNF40O75150 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RNF40O75150 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC8.6□□□□□ -1.03
RNF40O75150 RPSAP59-201ENST00000421048 890 ntBASIC8.6□□□□□ -1.03
RNF40O75150 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC8.6□□□□□ -1.03
RNF40O75150 USP9YP16-201ENST00000430287 407 ntBASIC8.6□□□□□ -1.03
RNF40O75150 NEFLP1-201ENST00000436364 984 ntBASIC8.6□□□□□ -1.03
RNF40O75150 BRK1P2-201ENST00000442875 223 ntBASIC8.6□□□□□ -1.03
RNF40O75150 AL591438.2-201ENST00000452635 691 ntBASIC8.6□□□□□ -1.03
RNF40O75150 USP9YP23-201ENST00000455085 407 ntBASIC8.6□□□□□ -1.03
RNF40O75150 AC092569.1-201ENST00000455192 258 ntBASIC8.6□□□□□ -1.03
RNF40O75150 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC8.6□□□□□ -1.03
RNF40O75150 RPL37-205ENST00000509877 637 ntTSL 5 BASIC8.6□□□□□ -1.03
RNF40O75150 AK6-204ENST00000512561 587 ntTSL 5 BASIC8.6□□□□□ -1.03
RNF40O75150 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC8.6□□□□□ -1.03
RNF40O75150 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC8.6□□□□□ -1.03
RNF40O75150 RGS4-207ENST00000527809 817 ntTSL 4 BASIC8.6□□□□□ -1.03
RNF40O75150 AC087276.1-201ENST00000529659 480 ntBASIC8.6□□□□□ -1.03
RNF40O75150 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC8.6□□□□□ -1.03
RNF40O75150 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC8.6□□□□□ -1.03
RNF40O75150 NDFIP1P1-201ENST00000543144 525 ntBASIC8.6□□□□□ -1.03
RNF40O75150 VDAC2P2-201ENST00000544463 901 ntBASIC8.6□□□□□ -1.03
RNF40O75150 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC8.6□□□□□ -1.03
RNF40O75150 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC8.6□□□□□ -1.03
RNF40O75150 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC8.6□□□□□ -1.03
RNF40O75150 AP001004.1-201ENST00000582468 324 ntBASIC8.6□□□□□ -1.03
RNF40O75150 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC8.6□□□□□ -1.03
RNF40O75150 BNIP3P23-201ENST00000599655 511 ntBASIC8.6□□□□□ -1.03
RNF40O75150 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC8.6□□□□□ -1.03
RNF40O75150 MARK3P1-201ENST00000604796 643 ntBASIC8.6□□□□□ -1.03
RNF40O75150 RN7SL113P-201ENST00000619959 299 ntBASIC8.6□□□□□ -1.03
RNF40O75150 AC116563.2-201ENST00000624751 535 ntBASIC8.6□□□□□ -1.03
RNF40O75150 AC069542.2-201ENST00000624816 216 ntBASIC8.6□□□□□ -1.03
RNF40O75150 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC8.6□□□□□ -1.03
RNF40O75150 RASSF3-206ENST00000637125 1060 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
RNF40O75150 MIR1302-1-201ENST00000637932 143 ntBASIC8.6□□□□□ -1.03
RNF40O75150 CRYM-AS1-204ENST00000637983 556 ntBASIC8.6□□□□□ -1.03
RNF40O75150 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
RNF40O75150 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RNF40O75150 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
RNF40O75150 AP002907.1-201ENST00000606361 1430 ntBASIC8.6□□□□□ -1.03
RNF40O75150 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC8.6□□□□□ -1.03
RNF40O75150 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RNF40O75150 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC8.6□□□□□ -1.03
RNF40O75150 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC8.6□□□□□ -1.03
RNF40O75150 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RNF40O75150 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RNF40O75150 AC105046.1-201ENST00000566457 4997 ntBASIC8.6□□□□□ -1.03
RNF40O75150 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
RNF40O75150 AP001350.1-201ENST00000601906 1524 ntBASIC8.59□□□□□ -1.03
RNF40O75150 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC8.59□□□□□ -1.03
RNF40O75150 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
RNF40O75150 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
RNF40O75150 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
RNF40O75150 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
RNF40O75150 AC006058.1-201ENST00000568686 5067 ntBASIC8.59□□□□□ -1.03
RNF40O75150 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
RNF40O75150 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
RNF40O75150 DAZ4-203ENST00000382432 2405 ntTSL 5 BASIC8.59□□□□□ -1.03
RNF40O75150 DAZ2-205ENST00000382433 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
RNF40O75150 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RNF40O75150 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC8.59□□□□□ -1.03
RNF40O75150 GLRA4-201ENST00000372617 1795 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
RNF40O75150 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
RNF40O75150 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
RNF40O75150 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RNF40O75150 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RNF40O75150 RN7SKP239-201ENST00000364814 295 ntBASIC8.59□□□□□ -1.03
RNF40O75150 AC093392.1-201ENST00000366280 340 ntBASIC8.59□□□□□ -1.03
RNF40O75150 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
RNF40O75150 SNORD65.1-201ENST00000390889 71 ntBASIC8.59□□□□□ -1.03
RNF40O75150 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC8.59□□□□□ -1.03
RNF40O75150 CCDC134-202ENST00000402061 525 ntTSL 2 BASIC8.59□□□□□ -1.03
RNF40O75150 EEF1GP6-201ENST00000402309 905 ntBASIC8.59□□□□□ -1.03
RNF40O75150 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
RNF40O75150 RNU6-575P-201ENST00000411326 105 ntBASIC8.59□□□□□ -1.03
RNF40O75150 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC8.59□□□□□ -1.03
RNF40O75150 RPS7P15-201ENST00000415804 584 ntBASIC8.59□□□□□ -1.03
RNF40O75150 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC8.59□□□□□ -1.03
RNF40O75150 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms