Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM38O00635 Z68868.1-201ENST00000429048 544 ntBASIC6.32□□□□□ -1.4
TRIM38O00635 RPS29P14-201ENST00000431518 171 ntBASIC6.32□□□□□ -1.4
TRIM38O00635 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM38O00635 PNKDP1-201ENST00000435914 430 ntBASIC6.32□□□□□ -1.4
TRIM38O00635 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM38O00635 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.32□□□□□ -1.4
TRIM38O00635 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM38O00635 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM38O00635 AP002453.1-201ENST00000492327 668 ntBASIC6.32□□□□□ -1.4
TRIM38O00635 SNX18P24-201ENST00000505249 671 ntBASIC6.32□□□□□ -1.4
TRIM38O00635 HAUS1P1-201ENST00000505275 832 ntBASIC6.32□□□□□ -1.4
TRIM38O00635 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.32□□□□□ -1.4
TRIM38O00635 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM38O00635 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM38O00635 AC036111.2-201ENST00000533247 901 ntBASIC6.32□□□□□ -1.4
TRIM38O00635 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM38O00635 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.32□□□□□ -1.4
TRIM38O00635 AC073916.1-201ENST00000545095 130 ntBASIC6.32□□□□□ -1.4
TRIM38O00635 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM38O00635 CKS1BP1-201ENST00000555221 240 ntBASIC6.32□□□□□ -1.4
TRIM38O00635 MTND1P8-201ENST00000571424 950 ntBASIC6.32□□□□□ -1.4
TRIM38O00635 AP001496.3-201ENST00000580230 913 ntBASIC6.32□□□□□ -1.4
TRIM38O00635 RN7SL475P-201ENST00000583379 298 ntBASIC6.32□□□□□ -1.4
TRIM38O00635 AL157899.1-201ENST00000604110 936 ntBASIC6.32□□□□□ -1.4
TRIM38O00635 AC073046.2-201ENST00000604756 527 ntBASIC6.32□□□□□ -1.4
TRIM38O00635 PPATP2-201ENST00000605635 508 ntBASIC6.32□□□□□ -1.4
TRIM38O00635 AL355802.4-201ENST00000607635 548 ntBASIC6.32□□□□□ -1.4
TRIM38O00635 AP001437.1-201ENST00000608783 456 ntBASIC6.32□□□□□ -1.4
TRIM38O00635 U1.34-201ENST00000618578 162 ntBASIC6.32□□□□□ -1.4
TRIM38O00635 AL133370.2-201ENST00000619934 439 ntBASIC6.32□□□□□ -1.4
TRIM38O00635 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM38O00635 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.32□□□□□ -1.4
TRIM38O00635 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM38O00635 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM38O00635 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM38O00635 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM38O00635 AC011815.2-201ENST00000618230 2021 ntBASIC6.32□□□□□ -1.4
TRIM38O00635 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM38O00635 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
TRIM38O00635 LYARP1-201ENST00000436977 1501 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM38O00635 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM38O00635 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM38O00635 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
TRIM38O00635 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM38O00635 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM38O00635 COX6B1P3-201ENST00000312310 260 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM38O00635 RNA5SP350-201ENST00000363298 111 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 RNA5SP435-201ENST00000364044 108 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM38O00635 OR2W4P-201ENST00000406496 926 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 RN7SKP108-201ENST00000411367 328 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM38O00635 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM38O00635 RPL7AP14-201ENST00000424041 802 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 MTCYBP32-201ENST00000427945 1084 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 ZNF965P-201ENST00000432501 817 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 AC094019.1-201ENST00000434678 472 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 MTND1P26-201ENST00000440488 538 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 SNRPFP2-201ENST00000440710 251 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM38O00635 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.31□□□□□ -1.4
TRIM38O00635 AC093663.2-201ENST00000484625 313 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 AC131392.1-201ENST00000506490 633 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM38O00635 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
TRIM38O00635 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM38O00635 AC093770.1-201ENST00000511559 571 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM38O00635 RN7SKP35-201ENST00000517210 151 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM38O00635 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM38O00635 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.31□□□□□ -1.4
TRIM38O00635 AC008126.1-201ENST00000549019 480 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM38O00635 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM38O00635 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM38O00635 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM38O00635 KATNBL1P5-201ENST00000605015 517 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 AC024589.2-201ENST00000605642 1294 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 AC067838.1-201ENST00000606064 577 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 AC108865.2-201ENST00000606881 432 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM38O00635 AL138960.1-201ENST00000613838 513 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM38O00635 AC023510.2-201ENST00000622162 746 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 AC015722.2-201ENST00000622210 551 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 AC097520.1-201ENST00000624435 385 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 AC019080.5-201ENST00000624891 757 ntBASIC6.31□□□□□ -1.4
TRIM38O00635 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM38O00635 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM38O00635 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
TRIM38O00635 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM38O00635 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM38O00635 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM38O00635 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM38O00635 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms