Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 RN7SKP279-201ENST00000411383 298 ntBASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 RPL21P50-201ENST00000417698 477 ntBASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 RNGTTP1-201ENST00000420965 728 ntBASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 AC113412.1-201ENST00000425840 504 ntBASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 OR3D1P-201ENST00000438288 955 ntBASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 AL353803.3-201ENST00000444641 335 ntBASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 RPL12P39-201ENST00000455456 496 ntBASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 RPS3AP49-201ENST00000472161 790 ntBASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 AC069304.1-201ENST00000491593 704 ntBASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 AP004609.2-201ENST00000532177 190 ntBASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 AC115989.2-201ENST00000578640 563 ntBASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 MIR4660-201ENST00000583549 74 ntBASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 AL591167.1-201ENST00000607321 456 ntBASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 AL356752.1-201ENST00000615844 593 ntBASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 AL445670.1-201ENST00000618889 801 ntBASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 CR382285.2-201ENST00000624662 1495 ntBASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 AC009962.1-201ENST00000567327 3813 ntBASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
KCNIP3Q9Y2W7 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 CUL4AP1-201ENST00000514750 1863 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 AL049869.1-201ENST00000556933 1402 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 MTHFD2P5-201ENST00000320415 844 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 RNA5SP308-201ENST00000362532 115 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 PTPN2P1-201ENST00000423212 1072 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 GPN3P1-201ENST00000423883 535 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 VN1R21P-201ENST00000426703 765 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 OR6C71P-201ENST00000432580 913 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 AC096775.1-201ENST00000437724 448 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 HIGD1AP16-201ENST00000450986 258 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 SDC4P-201ENST00000453285 601 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 MINOS1P4-201ENST00000515470 318 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 IGHVII-49-1-201ENST00000521760 224 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 OR10D4P-201ENST00000525892 951 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 OR8A2P-201ENST00000528631 952 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 MTND2P17-201ENST00000550281 688 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 NANOGP3-201ENST00000605855 286 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 uc_338.26-201ENST00000612659 160 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 AC007786.3-201ENST00000615154 596 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 MIR6811-201ENST00000620409 58 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 MBD5-221ENST00000637159 902 ntTSL 5 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms