Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 Metazoa_SRP.176-201ENST00000619772 282 ntBASIC8.4□□□□□ -1.06
VPS9D1Q9Y2B5 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC8.4□□□□□ -1.06
VPS9D1Q9Y2B5 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.4□□□□□ -1.06
VPS9D1Q9Y2B5 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC8.4□□□□□ -1.06
VPS9D1Q9Y2B5 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
VPS9D1Q9Y2B5 MAMDC2-AS1-204ENST00000448377 1923 ntTSL 5 BASIC8.4□□□□□ -1.06
VPS9D1Q9Y2B5 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
VPS9D1Q9Y2B5 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
VPS9D1Q9Y2B5 BBS4-201ENST00000268057 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
VPS9D1Q9Y2B5 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
VPS9D1Q9Y2B5 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
VPS9D1Q9Y2B5 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
VPS9D1Q9Y2B5 HSPD1P5-201ENST00000511127 1720 ntBASIC8.4□□□□□ -1.07
VPS9D1Q9Y2B5 PTPDC1-201ENST00000288976 4398 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.07
VPS9D1Q9Y2B5 NRK-204ENST00000540278 1687 ntTSL 2 BASIC8.4□□□□□ -1.07
VPS9D1Q9Y2B5 AC007485.2-201ENST00000623493 1667 ntBASIC8.4□□□□□ -1.07
VPS9D1Q9Y2B5 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
VPS9D1Q9Y2B5 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 PBLD-202ENST00000309049 2165 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 TTC3P1-201ENST00000399586 6081 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AC114786.2-201ENST00000510090 1426 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 CXorf57-201ENST00000372544 3607 ntTSL 2 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AL137782.1-201ENST00000563635 4128 ntTSL 5 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 ADIPOQ-AS1-201ENST00000422718 3443 ntTSL 5 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 TGIF2LY-201ENST00000321217 905 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 RNU6-462P-201ENST00000362659 105 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 Y_RNA.112-201ENST00000363250 102 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 Y_RNA.574-201ENST00000384766 95 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 MIR525-201ENST00000384978 85 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 RPL10P10-201ENST00000403509 664 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 MORN2-203ENST00000409131 544 ntTSL 5 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AC007562.1-201ENST00000421819 517 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 HSPB1P1-201ENST00000423240 256 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AC146944.2-202ENST00000425529 658 ntTSL 3 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 VOPP1-205ENST00000427700 632 ntTSL 5 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AL669831.1-202ENST00000428504 417 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AC108448.2-201ENST00000431546 730 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AL606489.2-201ENST00000433886 234 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 MTND6P15-201ENST00000441157 521 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 SCDP1-201ENST00000455244 1081 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 TRBV1-201ENST00000476502 284 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 RPL29P23-201ENST00000486188 442 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 MTND5P4-201ENST00000514978 288 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 SNORD60.2-201ENST00000516883 86 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 RN7SKP295-201ENST00000517264 153 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 RPL10P9-201ENST00000522551 645 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 FABP5P7-201ENST00000524732 405 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 RPS3-207ENST00000526608 710 ntTSL 5 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AC087639.1-201ENST00000560974 920 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 LINC01227-202ENST00000561719 755 ntTSL 2 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AC026898.1-201ENST00000586404 571 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 ZNF415-223ENST00000601215 561 ntTSL 4 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AC023983.2-201ENST00000608010 562 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 FAM157A-202ENST00000615155 405 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 SNX18P12-201ENST00000624821 759 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AL049541.2-201ENST00000626377 555 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 ITFG2-AS1-202ENST00000636122 962 ntTSL 5 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AC124944.3-204ENST00000641191 150 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AC009135.2-201ENST00000624136 1768 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 HHAT-203ENST00000367010 3626 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 SELENON-205ENST00000630065 2994 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 TMEM144-201ENST00000296529 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 R3HDM2P1-201ENST00000505381 1960 ntBASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 APEX2-201ENST00000374987 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VPS9D1Q9Y2B5 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC8.38□□□□□ -1.07
VPS9D1Q9Y2B5 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
VPS9D1Q9Y2B5 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS9D1Q9Y2B5 CELF1-202ENST00000358597 2108 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
VPS9D1Q9Y2B5 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms