Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LINC01438-201ENST00000512794 556 ntTSL 4 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 Y_RNA.720-201ENST00000517166 92 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 LY96-202ENST00000518893 430 ntTSL 3 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 ARL6IP1P1-201ENST00000545836 610 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 TP53TG3HP-201ENST00000563487 346 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 AC090774.3-201ENST00000578666 742 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 TBX18-AS1-208ENST00000591225 762 ntTSL 5 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 AC243960.3-201ENST00000599316 580 ntTSL 4 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 AC009027.1-201ENST00000604510 479 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 AC104794.4-201ENST00000607181 446 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 ARID1A-209ENST00000615191 3804 ntTSL 5 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 AC037198.3-201ENST00000616754 526 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 AC040168.1-201ENST00000623594 991 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 SRP54-214ENST00000630962 162 ntTSL 5 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 AC026108.1-201ENST00000635444 547 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 NUP93-210ENST00000564887 2875 ntTSL 2 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 TRIM6-203ENST00000380107 2590 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
USB1Q9BQ65 LINC02035-201ENST00000610128 5476 ntBASIC7.69□□□□□ -1.18
USB1Q9BQ65 LINC02072-201ENST00000441895 2645 ntTSL 2 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 ZNF728-201ENST00000594710 2015 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
USB1Q9BQ65 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
USB1Q9BQ65 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 RNF138-201ENST00000257190 2071 ntTSL 2 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
USB1Q9BQ65 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
USB1Q9BQ65 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC7.69□□□□□ -1.18
USB1Q9BQ65 PBLD-202ENST00000309049 2165 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
USB1Q9BQ65 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 AL359922.2-201ENST00000581788 3017 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 SEC24A-202ENST00000398844 6299 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 DNAJC5G-204ENST00000406962 1562 ntTSL 5 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 AC095038.1-201ENST00000429248 1591 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 TDP1-202ENST00000393452 2370 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 DDAH1-202ENST00000426972 4017 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 LRTOMT-203ENST00000324866 2402 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 RBM18-201ENST00000417201 4974 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 OR2D3-201ENST00000317834 1070 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 ENSA-209ENST00000369016 923 ntTSL 5 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 PRR32-201ENST00000371125 1228 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 MORN5-201ENST00000373764 705 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 SNORD116-23-201ENST00000384645 92 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 MT-TP-201ENST00000387461 68 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 AC096664.1-201ENST00000393996 778 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 AC068050.1-201ENST00000394891 380 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 FGFR1OP2P1-201ENST00000395943 500 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 AL133406.1-201ENST00000404904 747 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 AL450338.1-201ENST00000407987 512 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 ZRANB2-AS2-203ENST00000415780 249 ntTSL 5 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 LINC00676-201ENST00000416090 474 ntTSL 5 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 LINCMD1-201ENST00000418518 462 ntTSL 5 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 RBM6-203ENST00000421682 684 ntTSL 2 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 DPY19L1P2-201ENST00000426647 915 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 AC244034.1-201ENST00000428027 792 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 RPS23P8-201ENST00000429775 330 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 RPEP2-201ENST00000432149 701 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 RPL31P44-201ENST00000447680 377 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 RPL7P59-201ENST00000447700 943 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 AL606490.6-201ENST00000453735 523 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 PET100-201ENST00000456958 219 ntTSL 2 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 RPS20P23-201ENST00000461683 354 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 RN7SL659P-201ENST00000483093 299 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 RN7SL653P-201ENST00000494134 293 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 AC106774.1-201ENST00000515105 321 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 RNU6-150P-201ENST00000516237 95 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 ATM-209ENST00000526567 560 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USB1Q9BQ65 AP001804.2-201ENST00000533932 910 ntBASIC7.68□□□□□ -1.18
USB1Q9BQ65 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC7.68□□□□□ -1.18
USB1Q9BQ65 AC084033.3-201ENST00000551421 451 ntTSL 2 BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms