Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TOPBP1Q92547 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
TOPBP1Q92547 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TOPBP1Q92547 NCOA4P3-201ENST00000513203 1877 ntBASIC9.42□□□□□ -0.9
TOPBP1Q92547 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TOPBP1Q92547 MFSD8-239ENST00000641590 2479 ntBASIC9.42□□□□□ -0.9
TOPBP1Q92547 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
TOPBP1Q92547 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC9.42□□□□□ -0.9
TOPBP1Q92547 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC9.42□□□□□ -0.9
TOPBP1Q92547 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC9.42□□□□□ -0.9
TOPBP1Q92547 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TOPBP1Q92547 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
TOPBP1Q92547 AC245028.1-201ENST00000423259 256 ntBASIC9.41□□□□□ -0.9
TOPBP1Q92547 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC9.41□□□□□ -0.9
TOPBP1Q92547 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC9.41□□□□□ -0.9
TOPBP1Q92547 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC9.41□□□□□ -0.9
TOPBP1Q92547 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC9.41□□□□□ -0.9
TOPBP1Q92547 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC9.41□□□□□ -0.9
TOPBP1Q92547 RN7SKP99-201ENST00000517028 307 ntBASIC9.41□□□□□ -0.9
TOPBP1Q92547 HMGB1P40-201ENST00000525121 540 ntBASIC9.41□□□□□ -0.9
TOPBP1Q92547 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC9.41□□□□□ -0.9
TOPBP1Q92547 BNIP3P1-201ENST00000547295 580 ntBASIC9.41□□□□□ -0.9
TOPBP1Q92547 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC9.41□□□□□ -0.9
TOPBP1Q92547 AL049779.3-201ENST00000557141 606 ntBASIC9.41□□□□□ -0.9
TOPBP1Q92547 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC9.41□□□□□ -0.9
TOPBP1Q92547 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC9.41□□□□□ -0.9
TOPBP1Q92547 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
TOPBP1Q92547 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TOPBP1Q92547 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
TOPBP1Q92547 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TOPBP1Q92547 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
TOPBP1Q92547 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
TOPBP1Q92547 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TOPBP1Q92547 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TOPBP1Q92547 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TOPBP1Q92547 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
TOPBP1Q92547 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
TOPBP1Q92547 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
TOPBP1Q92547 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
TOPBP1Q92547 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
TOPBP1Q92547 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC9.41□□□□□ -0.9
TOPBP1Q92547 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TOPBP1Q92547 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC9.41□□□□□ -0.9
TOPBP1Q92547 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC9.41□□□□□ -0.9
TOPBP1Q92547 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC9.41□□□□□ -0.9
TOPBP1Q92547 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
TOPBP1Q92547 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC9.41□□□□□ -0.9
TOPBP1Q92547 RPL5P22-201ENST00000480199 884 ntBASIC9.41□□□□□ -0.9
TOPBP1Q92547 RPL37AP8-201ENST00000494116 276 ntBASIC9.41□□□□□ -0.9
TOPBP1Q92547 PRELID3BP5-201ENST00000508612 460 ntBASIC9.41□□□□□ -0.9
TOPBP1Q92547 UBE2Q2P10-201ENST00000514854 900 ntBASIC9.41□□□□□ -0.9
TOPBP1Q92547 MIR3934-201ENST00000579806 107 ntBASIC9.41□□□□□ -0.9
TOPBP1Q92547 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC9.41□□□□□ -0.9
TOPBP1Q92547 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC9.41□□□□□ -0.9
TOPBP1Q92547 AC008745.1-201ENST00000604064 271 ntBASIC9.41□□□□□ -0.9
TOPBP1Q92547 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TOPBP1Q92547 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
TOPBP1Q92547 CASC19-205ENST00000641013 1411 ntBASIC9.4□□□□□ -0.9
TOPBP1Q92547 PWAR1-201ENST00000624188 2414 ntBASIC9.4□□□□□ -0.9
TOPBP1Q92547 AC012618.3-205ENST00000637896 1496 ntBASIC9.4□□□□□ -0.9
TOPBP1Q92547 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TOPBP1Q92547 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TOPBP1Q92547 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TOPBP1Q92547 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
TOPBP1Q92547 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
TOPBP1Q92547 RN7SKP151-201ENST00000410230 316 ntBASIC9.4□□□□□ -0.91
TOPBP1Q92547 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC9.4□□□□□ -0.91
TOPBP1Q92547 AC093162.1-201ENST00000419682 124 ntBASIC9.4□□□□□ -0.91
TOPBP1Q92547 AC007562.1-201ENST00000421819 517 ntBASIC9.4□□□□□ -0.91
TOPBP1Q92547 AC023274.2-201ENST00000445264 521 ntBASIC9.4□□□□□ -0.91
TOPBP1Q92547 RPL7L1P3-201ENST00000455249 689 ntBASIC9.4□□□□□ -0.91
TOPBP1Q92547 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC9.4□□□□□ -0.91
TOPBP1Q92547 AC092490.3-201ENST00000545370 572 ntBASIC9.4□□□□□ -0.91
TOPBP1Q92547 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC9.4□□□□□ -0.91
TOPBP1Q92547 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC9.4□□□□□ -0.91
TOPBP1Q92547 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC9.4□□□□□ -0.91
TOPBP1Q92547 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
TOPBP1Q92547 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
TOPBP1Q92547 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
TOPBP1Q92547 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
TOPBP1Q92547 AC131649.2-201ENST00000624925 4439 ntBASIC9.4□□□□□ -0.91
TOPBP1Q92547 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC9.39□□□□□ -0.91
TOPBP1Q92547 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
TOPBP1Q92547 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TOPBP1Q92547 AL121768.1-201ENST00000613917 2544 ntBASIC9.39□□□□□ -0.91
TOPBP1Q92547 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC9.39□□□□□ -0.91
TOPBP1Q92547 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TOPBP1Q92547 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TOPBP1Q92547 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
TOPBP1Q92547 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
TOPBP1Q92547 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
TOPBP1Q92547 SNORA51.8-201ENST00000384234 132 ntBASIC9.39□□□□□ -0.91
TOPBP1Q92547 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC9.39□□□□□ -0.91
TOPBP1Q92547 PPP2R2DP1-201ENST00000420526 637 ntBASIC9.39□□□□□ -0.91
TOPBP1Q92547 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC9.39□□□□□ -0.91
TOPBP1Q92547 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TOPBP1Q92547 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TOPBP1Q92547 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC9.39□□□□□ -0.91
TOPBP1Q92547 TRY2P-201ENST00000448860 689 ntBASIC9.39□□□□□ -0.91
TOPBP1Q92547 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 226.8 ms