Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 ZNF736P5Y-201ENST00000451173 805 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 RANP1-206ENST00000455094 651 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC092754.2-201ENST00000463506 460 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC011979.1-201ENST00000472300 483 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC090058.1-201ENST00000498788 435 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC084024.2-201ENST00000503480 791 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC111000.2-201ENST00000507775 550 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC010625.1-201ENST00000511296 403 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 RNA5SP473-201ENST00000516402 125 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC007537.1-201ENST00000539347 327 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 MIR3912-201ENST00000577566 105 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC068790.6-201ENST00000602558 258 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AP000238.1-201ENST00000608759 426 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC107075.1-201ENST00000613695 314 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AL035661.1-201ENST00000620459 1144 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AL132796.3-201ENST00000624703 900 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC010608.2-201ENST00000624830 470 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 TTC39DP-201ENST00000416781 1688 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC025040.2-201ENST00000558657 1852 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 RNA5SP308-201ENST00000362532 115 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 Y_RNA.201-201ENST00000364052 96 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 RN7SKP171-201ENST00000364417 303 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC006511.2-201ENST00000388966 660 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 SNORA11.3-201ENST00000408471 128 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 THEM7P-201ENST00000419556 672 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 RPL5P6-201ENST00000425640 886 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC128677.1-201ENST00000436016 442 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 YWHAZP7-201ENST00000436906 631 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC114755.4-201ENST00000439114 443 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AL138899.2-201ENST00000439139 499 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC245291.3-201ENST00000443400 292 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 RN7SL654P-201ENST00000479178 292 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC104971.1-201ENST00000495117 578 ntBASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms