Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 RN7SL786P-201ENST00000579130 298 ntBASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 AP001542.2-201ENST00000593141 364 ntBASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 AC016629.2-201ENST00000597341 199 ntBASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 AC022239.4-201ENST00000602626 504 ntBASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 AL078623.1-201ENST00000602702 907 ntBASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 AC068726.1-201ENST00000610993 341 ntBASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 MESTIT1_2.1-201ENST00000616328 235 ntBASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 AC018816.2-201ENST00000621460 353 ntBASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 AP003068.4-201ENST00000623192 802 ntBASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
LYSMD3Q7Z3D4 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AC027279.1-201ENST00000568885 4284 ntBASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 RNA5SP483-201ENST00000363431 118 ntBASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 RNU6-660P-201ENST00000364566 109 ntBASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 MIR181C-201ENST00000384881 110 ntBASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 RPS27AP11-201ENST00000402798 447 ntBASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 RPSAP72-201ENST00000407020 358 ntBASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 VDAC1P2-201ENST00000423609 850 ntBASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AC104843.2-201ENST00000427666 297 ntBASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AL035458.1-201ENST00000433096 585 ntBASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 FO393419.1-201ENST00000443746 355 ntBASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 RPL7P24-201ENST00000493052 752 ntBASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AC079768.1-201ENST00000503181 711 ntBASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 DKK2-202ENST00000510463 908 ntTSL 3 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 OR7K1P-201ENST00000546439 926 ntBASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AC092133.1-201ENST00000565828 719 ntBASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 RPS3AP23-202ENST00000574601 686 ntBASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 RN7SL25P-201ENST00000583862 260 ntBASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC7.69□□□□□ -1.18
LYSMD3Q7Z3D4 AC129492.5-201ENST00000603489 315 ntBASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms