Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
LYSMD4Q5XG99 AC073429.2-201ENST00000569694 1444 ntBASIC5.87□□□□□ -1.47
LYSMD4Q5XG99 AL132656.3-201ENST00000606384 1595 ntBASIC5.87□□□□□ -1.47
LYSMD4Q5XG99 ZNF812P-201ENST00000457674 1694 ntBASIC5.87□□□□□ -1.47
LYSMD4Q5XG99 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LYSMD4Q5XG99 C4BPAP1-201ENST00000415474 1893 ntBASIC5.87□□□□□ -1.47
LYSMD4Q5XG99 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LYSMD4Q5XG99 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
LYSMD4Q5XG99 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
LYSMD4Q5XG99 TNPO1P2-201ENST00000426249 2665 ntBASIC5.87□□□□□ -1.47
LYSMD4Q5XG99 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LYSMD4Q5XG99 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.87□□□□□ -1.47
LYSMD4Q5XG99 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.87□□□□□ -1.47
LYSMD4Q5XG99 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LYSMD4Q5XG99 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LYSMD4Q5XG99 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LYSMD4Q5XG99 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 AC011369.2-201ENST00000624423 1567 ntBASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 AL590763.1-201ENST00000398297 1545 ntBASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 NPM1P22-201ENST00000427761 952 ntBASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 AL022331.1-201ENST00000429025 477 ntBASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 OR13K1P-201ENST00000444577 975 ntBASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 AL157385.1-201ENST00000446973 268 ntBASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 AL606490.1-201ENST00000452266 765 ntBASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 COPS8P2-201ENST00000473228 627 ntBASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 OR2AO1P-201ENST00000476497 403 ntBASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 RNU6-1334P-201ENST00000516032 105 ntBASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 AP006245.2-201ENST00000522004 300 ntBASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 IMMP1LP3-201ENST00000604197 224 ntBASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 AC013731.1-201ENST00000604340 883 ntBASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 AC007683.2-201ENST00000624681 714 ntBASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 AC063952.1-203ENST00000634410 658 ntBASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 AC022726.2-201ENST00000634673 547 ntBASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LYSMD4Q5XG99 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 PARP4P1-201ENST00000435945 2337 ntBASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 CASC19-255ENST00000641733 1385 ntBASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 AC235565.1-201ENST00000456962 1325 ntBASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 MIR640-201ENST00000385086 96 ntBASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 RN7SKP29-201ENST00000410957 272 ntBASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 DPPA2P3-201ENST00000411853 655 ntBASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 NANOGP4-201ENST00000427230 913 ntBASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 RPS27P18-201ENST00000431701 247 ntBASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 GAPDHP58-201ENST00000438477 1006 ntBASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 RAB28P2-201ENST00000454299 641 ntBASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 RN7SL352P-201ENST00000466002 277 ntBASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 AL133372.1-201ENST00000493565 745 ntBASIC5.85□□□□□ -1.47
LYSMD4Q5XG99 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms