Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TMEM87A-203ENST00000448392 3049 ntTSL 1 (best) BASIC8.83□□□□□ -1
VARS2Q5ST30 OR4A15-201ENST00000314706 1035 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 MIR365B-201ENST00000362317 111 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 Y_RNA.97-201ENST00000363094 102 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 Y_RNA.555-201ENST00000384673 110 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 MRPL42P3-201ENST00000401492 326 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 NPM1P38-201ENST00000403835 865 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 RPL21P107-201ENST00000411449 460 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 AC003080.1-201ENST00000413552 767 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 NDUFB4P5-201ENST00000415445 361 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 AC243428.1-201ENST00000421099 264 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 AC126124.1-201ENST00000426104 185 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC8.83□□□□□ -1
VARS2Q5ST30 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC8.83□□□□□ -1
VARS2Q5ST30 AC016734.1-201ENST00000436998 654 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 WDR82P1-201ENST00000439836 939 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 AL591438.2-201ENST00000452635 691 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 RN7SL418P-201ENST00000473031 287 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC8.83□□□□□ -1
VARS2Q5ST30 AC008619.1-201ENST00000524312 567 ntTSL 4 BASIC8.83□□□□□ -1
VARS2Q5ST30 AP000676.2-201ENST00000529711 301 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC8.83□□□□□ -1
VARS2Q5ST30 AC004241.1-203ENST00000552502 460 ntTSL 3 BASIC8.83□□□□□ -1
VARS2Q5ST30 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC8.83□□□□□ -1
VARS2Q5ST30 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC8.83□□□□□ -1
VARS2Q5ST30 AC124068.1-201ENST00000563131 678 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC8.83□□□□□ -1
VARS2Q5ST30 AC090826.1-203ENST00000569235 490 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 TAPT1-AS1-203ENST00000573950 510 ntTSL 3 BASIC8.83□□□□□ -1
VARS2Q5ST30 MIR4682-201ENST00000580643 80 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 AC139085.1-201ENST00000582716 182 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 AC106782.6-201ENST00000611264 512 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 AL109933.4-201ENST00000612111 157 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 AC097641.3-201ENST00000613523 464 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 AC083806.3-201ENST00000614016 455 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 AC141273.2-201ENST00000618989 130 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC8.83□□□□□ -1
VARS2Q5ST30 MIR3120-201ENST00000636555 81 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC8.83□□□□□ -1
VARS2Q5ST30 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC8.83□□□□□ -1
VARS2Q5ST30 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
VARS2Q5ST30 LINC01258-201ENST00000512517 2059 ntTSL 2 BASIC8.83□□□□□ -1
VARS2Q5ST30 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC8.83□□□□□ -1
VARS2Q5ST30 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
VARS2Q5ST30 LYARP1-201ENST00000436977 1501 ntBASIC8.83□□□□□ -1
VARS2Q5ST30 SRPK2-214ENST00000489828 2560 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
VARS2Q5ST30 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC8.83□□□□□ -1
VARS2Q5ST30 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC8.83□□□□□ -1
VARS2Q5ST30 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC8.83□□□□□ -1
VARS2Q5ST30 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC8.83□□□□□ -1
VARS2Q5ST30 LINC00934-202ENST00000630357 2291 ntTSL 2 BASIC8.83□□□□□ -1
VARS2Q5ST30 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC8.83□□□□□ -1
VARS2Q5ST30 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC8.83□□□□□ -1
VARS2Q5ST30 TCF4-241ENST00000568740 2628 ntTSL 5 BASIC8.83□□□□□ -1
VARS2Q5ST30 LINC01133-203ENST00000635112 1996 ntTSL 5 BASIC8.82□□□□□ -1
VARS2Q5ST30 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
VARS2Q5ST30 TUBBP10-201ENST00000427668 1301 ntBASIC8.82□□□□□ -1
VARS2Q5ST30 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC8.82□□□□□ -1
VARS2Q5ST30 ABCA11P-201ENST00000451020 1815 ntTSL 2 BASIC8.82□□□□□ -1
VARS2Q5ST30 STAU2-AS1-201ENST00000517604 2076 ntTSL 2 BASIC8.82□□□□□ -1
VARS2Q5ST30 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VARS2Q5ST30 SLC24A1-203ENST00000399033 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
VARS2Q5ST30 IQCH-AS1-203ENST00000559298 5753 ntTSL 5 BASIC8.82□□□□□ -1
VARS2Q5ST30 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC8.82□□□□□ -1
VARS2Q5ST30 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VARS2Q5ST30 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC8.82□□□□□ -1
VARS2Q5ST30 DCAF4-212ENST00000553457 2896 ntTSL 1 (best) BASIC8.82□□□□□ -1
VARS2Q5ST30 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VARS2Q5ST30 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VARS2Q5ST30 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VARS2Q5ST30 OR1J2-201ENST00000335302 942 ntAPPRIS P1 BASIC8.82□□□□□ -1
VARS2Q5ST30 RNU4-20P-201ENST00000365601 151 ntBASIC8.82□□□□□ -1
VARS2Q5ST30 RPL7P58-201ENST00000402913 758 ntBASIC8.82□□□□□ -1
VARS2Q5ST30 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC8.82□□□□□ -1
VARS2Q5ST30 AC019181.1-201ENST00000417151 310 ntBASIC8.82□□□□□ -1
VARS2Q5ST30 DNAJC19P7-201ENST00000428811 344 ntBASIC8.82□□□□□ -1
VARS2Q5ST30 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC8.82□□□□□ -1
VARS2Q5ST30 AMYP1-201ENST00000440059 1023 ntBASIC8.82□□□□□ -1
VARS2Q5ST30 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC8.82□□□□□ -1
VARS2Q5ST30 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC8.82□□□□□ -1
VARS2Q5ST30 SSR1-203ENST00000462112 1094 ntTSL 4 BASIC8.82□□□□□ -1
VARS2Q5ST30 RPS27AP17-201ENST00000463344 455 ntBASIC8.82□□□□□ -1
VARS2Q5ST30 AC104109.1-201ENST00000498563 436 ntBASIC8.82□□□□□ -1
VARS2Q5ST30 SNX5P1-201ENST00000505757 1041 ntBASIC8.82□□□□□ -1
VARS2Q5ST30 AC110794.1-201ENST00000505816 425 ntBASIC8.82□□□□□ -1
VARS2Q5ST30 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC8.82□□□□□ -1
VARS2Q5ST30 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC8.82□□□□□ -1
VARS2Q5ST30 RNU6-1225P-201ENST00000516336 65 ntBASIC8.82□□□□□ -1
VARS2Q5ST30 AC138356.2-201ENST00000521192 667 ntBASIC8.82□□□□□ -1
VARS2Q5ST30 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC8.82□□□□□ -1
VARS2Q5ST30 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC8.82□□□□□ -1
VARS2Q5ST30 AC008147.3-201ENST00000548666 354 ntBASIC8.82□□□□□ -1
VARS2Q5ST30 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC8.82□□□□□ -1
VARS2Q5ST30 AC027808.2-203ENST00000558261 638 ntTSL 5 BASIC8.82□□□□□ -1
VARS2Q5ST30 TBC1D29-201ENST00000579181 652 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
VARS2Q5ST30 MIR3682-201ENST00000581338 84 ntBASIC8.82□□□□□ -1
VARS2Q5ST30 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC8.82□□□□□ -1
VARS2Q5ST30 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC8.82□□□□□ -1
VARS2Q5ST30 TBC1D29-204ENST00000584297 602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms