Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 AC015689.2-201ENST00000528172 1738 ntBASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 RNA5SP273-201ENST00000362484 113 ntBASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 RNA5SP514-201ENST00000363717 111 ntBASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 AC245096.1-201ENST00000413104 546 ntBASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 TRIM60P16-201ENST00000444048 694 ntBASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 CFL1P4-201ENST00000451536 498 ntBASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 CST12P-201ENST00000457644 362 ntBASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 ACA64.4-201ENST00000459070 127 ntBASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 uc_338.26-201ENST00000612659 160 ntBASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HERC4Q5GLZ8 ZNF402P-201ENST00000404435 3100 ntBASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 SNORA74A-201ENST00000364089 198 ntBASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 SDHDP6-201ENST00000414693 480 ntBASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 CUBNP2-201ENST00000443534 1139 ntBASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 AC092593.2-201ENST00000513866 913 ntBASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 AP003080.1-202ENST00000526526 915 ntBASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 AC068768.2-201ENST00000602352 343 ntBASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 AC092944.2-201ENST00000605443 889 ntBASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 RN7SL787P-201ENST00000613000 284 ntBASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 AC245014.3-201ENST00000618589 347 ntBASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HERC4Q5GLZ8 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 OR9K1P-201ENST00000326513 941 ntBASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 RN7SKP77-201ENST00000363261 353 ntBASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 SNRPEP6-201ENST00000407465 277 ntBASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 RNU6-233P-201ENST00000410845 141 ntBASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 MYL6P5-201ENST00000412707 459 ntBASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 NMD3P2-201ENST00000421815 761 ntBASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 AL365220.1-201ENST00000432923 399 ntBASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 SDC4P-201ENST00000453285 601 ntBASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 AC128716.1-201ENST00000475129 166 ntBASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 Y_RNA.667-201ENST00000516212 107 ntBASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
HERC4Q5GLZ8 AC079600.1-201ENST00000550326 297 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms