Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLRN1P58418 MRPL32P1-201ENST00000406301 247 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.92□□□□□ -1.46
CLRN1P58418 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLRN1P58418 RNA5SP231-201ENST00000410496 138 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC5.92□□□□□ -1.46
CLRN1P58418 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.92□□□□□ -1.46
CLRN1P58418 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.92□□□□□ -1.46
CLRN1P58418 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.92□□□□□ -1.46
CLRN1P58418 AL672212.1-201ENST00000422246 400 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 AL139415.1-201ENST00000424862 352 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.92□□□□□ -1.46
CLRN1P58418 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.92□□□□□ -1.46
CLRN1P58418 RPL26P30-201ENST00000453533 435 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 EIF3LP2-201ENST00000457262 807 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.92□□□□□ -1.46
CLRN1P58418 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.92□□□□□ -1.46
CLRN1P58418 AC079203.1-201ENST00000487972 404 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 AC023818.1-201ENST00000498379 384 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.92□□□□□ -1.46
CLRN1P58418 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.92□□□□□ -1.46
CLRN1P58418 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.92□□□□□ -1.46
CLRN1P58418 AL390198.2-201ENST00000510553 222 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.92□□□□□ -1.46
CLRN1P58418 AC093878.1-201ENST00000515630 432 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.92□□□□□ -1.46
CLRN1P58418 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.92□□□□□ -1.46
CLRN1P58418 IGHV3-57-201ENST00000520143 280 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.92□□□□□ -1.46
CLRN1P58418 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.92□□□□□ -1.46
CLRN1P58418 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.92□□□□□ -1.46
CLRN1P58418 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.92□□□□□ -1.46
CLRN1P58418 AP000662.1-201ENST00000530952 487 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC5.92□□□□□ -1.46
CLRN1P58418 MTCO2P15-201ENST00000532655 656 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 AC023050.2-201ENST00000544968 387 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 AC089984.3-201ENST00000552838 363 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
CLRN1P58418 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.92□□□□□ -1.46
CLRN1P58418 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLRN1P58418 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.92□□□□□ -1.46
CLRN1P58418 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.92□□□□□ -1.46
CLRN1P58418 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.92□□□□□ -1.46
CLRN1P58418 AL049840.5-201ENST00000602827 552 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 AL109653.1-201ENST00000603091 248 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 AL035411.2-201ENST00000604022 421 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.92□□□□□ -1.46
CLRN1P58418 AL139407.1-201ENST00000613826 1175 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 AC123767.1-202ENST00000620407 817 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 AC027506.1-201ENST00000621395 198 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 AL132796.3-201ENST00000624703 900 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.92□□□□□ -1.46
CLRN1P58418 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.92□□□□□ -1.46
CLRN1P58418 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.92□□□□□ -1.46
CLRN1P58418 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CLRN1P58418 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.92□□□□□ -1.46
CLRN1P58418 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CLRN1P58418 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CLRN1P58418 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLRN1P58418 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.92□□□□□ -1.46
CLRN1P58418 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.92□□□□□ -1.46
CLRN1P58418 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLRN1P58418 AC095038.1-201ENST00000429248 1591 ntBASIC5.92□□□□□ -1.46
CLRN1P58418 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLRN1P58418 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.92□□□□□ -1.46
CLRN1P58418 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLRN1P58418 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
CLRN1P58418 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLRN1P58418 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLRN1P58418 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.91□□□□□ -1.46
CLRN1P58418 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CLRN1P58418 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLRN1P58418 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
CLRN1P58418 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5.91□□□□□ -1.46
CLRN1P58418 AC107980.1-201ENST00000558671 3355 ntBASIC5.91□□□□□ -1.46
CLRN1P58418 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.91□□□□□ -1.46
CLRN1P58418 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CLRN1P58418 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLRN1P58418 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC5.91□□□□□ -1.46
CLRN1P58418 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CLRN1P58418 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLRN1P58418 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLRN1P58418 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CLRN1P58418 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CLRN1P58418 Y_RNA.318-201ENST00000365131 97 ntBASIC5.91□□□□□ -1.46
CLRN1P58418 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.91□□□□□ -1.46
CLRN1P58418 CDY17P-201ENST00000414121 1282 ntBASIC5.91□□□□□ -1.46
CLRN1P58418 HSFY4P-201ENST00000415994 1181 ntBASIC5.91□□□□□ -1.46
CLRN1P58418 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLRN1P58418 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.91□□□□□ -1.46
CLRN1P58418 RPL18AP14-201ENST00000417685 526 ntBASIC5.91□□□□□ -1.46
CLRN1P58418 MTND4P3-201ENST00000417829 541 ntBASIC5.91□□□□□ -1.46
CLRN1P58418 AHCYP8-201ENST00000425108 209 ntBASIC5.91□□□□□ -1.46
CLRN1P58418 CDY8P-201ENST00000428380 1279 ntBASIC5.91□□□□□ -1.46
CLRN1P58418 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.91□□□□□ -1.46
CLRN1P58418 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.91□□□□□ -1.46
CLRN1P58418 CDY12P-201ENST00000440679 1015 ntBASIC5.91□□□□□ -1.46
CLRN1P58418 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.91□□□□□ -1.46
CLRN1P58418 CDY13P-201ENST00000445813 1015 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms