Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
RIPK4P57078 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.62□□□□□ -1.19
RIPK4P57078 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7.62□□□□□ -1.19
RIPK4P57078 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
RIPK4P57078 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC7.62□□□□□ -1.19
RIPK4P57078 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RIPK4P57078 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RIPK4P57078 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
RIPK4P57078 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.62□□□□□ -1.19
RIPK4P57078 AK4P4-201ENST00000419465 646 ntBASIC7.62□□□□□ -1.19
RIPK4P57078 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.62□□□□□ -1.19
RIPK4P57078 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
RIPK4P57078 AC096775.1-201ENST00000437724 448 ntBASIC7.62□□□□□ -1.19
RIPK4P57078 AC015983.1-201ENST00000441577 373 ntBASIC7.62□□□□□ -1.19
RIPK4P57078 RPL31P15-201ENST00000449770 338 ntBASIC7.62□□□□□ -1.19
RIPK4P57078 RPS23P6-201ENST00000466136 431 ntBASIC7.62□□□□□ -1.19
RIPK4P57078 AC006539.1-201ENST00000481419 501 ntBASIC7.62□□□□□ -1.19
RIPK4P57078 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC7.62□□□□□ -1.19
RIPK4P57078 AC009120.1-201ENST00000493458 473 ntBASIC7.62□□□□□ -1.19
RIPK4P57078 RN7SKP67-201ENST00000515905 235 ntBASIC7.62□□□□□ -1.19
RIPK4P57078 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.62□□□□□ -1.19
RIPK4P57078 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC7.62□□□□□ -1.19
RIPK4P57078 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.62□□□□□ -1.19
RIPK4P57078 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.62□□□□□ -1.19
RIPK4P57078 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.62□□□□□ -1.19
RIPK4P57078 DPPA2P4-201ENST00000563717 878 ntBASIC7.62□□□□□ -1.19
RIPK4P57078 AC096996.1-201ENST00000563813 325 ntBASIC7.62□□□□□ -1.19
RIPK4P57078 RN7SL544P-201ENST00000617232 284 ntBASIC7.62□□□□□ -1.19
RIPK4P57078 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RIPK4P57078 RN7SL763P-201ENST00000620922 284 ntBASIC7.62□□□□□ -1.19
RIPK4P57078 AL512356.3-201ENST00000623005 461 ntBASIC7.62□□□□□ -1.19
RIPK4P57078 MIR193BHG-214ENST00000641765 509 ntBASIC7.62□□□□□ -1.19
RIPK4P57078 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.62□□□□□ -1.19
RIPK4P57078 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
RIPK4P57078 MFSD8-239ENST00000641590 2479 ntBASIC7.62□□□□□ -1.19
RIPK4P57078 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.62□□□□□ -1.19
RIPK4P57078 AC007842.1-201ENST00000597336 2039 ntBASIC7.62□□□□□ -1.19
RIPK4P57078 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
RIPK4P57078 ZNF969P-201ENST00000510345 2341 ntBASIC7.62□□□□□ -1.19
RIPK4P57078 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RIPK4P57078 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RIPK4P57078 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
RIPK4P57078 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.62□□□□□ -1.19
RIPK4P57078 OR13C1P-202ENST00000641378 2919 ntBASIC7.62□□□□□ -1.19
RIPK4P57078 AL355834.1-201ENST00000556602 3965 ntBASIC7.61□□□□□ -1.19
RIPK4P57078 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.61□□□□□ -1.19
RIPK4P57078 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RIPK4P57078 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RIPK4P57078 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
RIPK4P57078 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC7.61□□□□□ -1.19
RIPK4P57078 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RIPK4P57078 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
RIPK4P57078 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RIPK4P57078 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
RIPK4P57078 RNA5SP394-201ENST00000364216 119 ntBASIC7.61□□□□□ -1.19
RIPK4P57078 RN7SKP78-201ENST00000364711 318 ntBASIC7.61□□□□□ -1.19
RIPK4P57078 HMGB1P20-201ENST00000402555 677 ntBASIC7.61□□□□□ -1.19
RIPK4P57078 HIST1H3PS1-201ENST00000404612 417 ntBASIC7.61□□□□□ -1.19
RIPK4P57078 BX119321.1-201ENST00000428912 797 ntBASIC7.61□□□□□ -1.19
RIPK4P57078 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC7.61□□□□□ -1.19
RIPK4P57078 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.61□□□□□ -1.19
RIPK4P57078 RPL36AP39-201ENST00000445859 318 ntBASIC7.61□□□□□ -1.19
RIPK4P57078 AC016724.1-201ENST00000453215 421 ntBASIC7.61□□□□□ -1.19
RIPK4P57078 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.61□□□□□ -1.19
RIPK4P57078 PPIAP19-201ENST00000486414 492 ntBASIC7.61□□□□□ -1.19
RIPK4P57078 AC127024.6-201ENST00000621598 424 ntBASIC7.61□□□□□ -1.19
RIPK4P57078 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.61□□□□□ -1.19
RIPK4P57078 AC103703.1-201ENST00000634783 663 ntBASIC7.61□□□□□ -1.19
RIPK4P57078 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7.61□□□□□ -1.19
RIPK4P57078 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RIPK4P57078 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
RIPK4P57078 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RIPK4P57078 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RIPK4P57078 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RIPK4P57078 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RIPK4P57078 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC7.61□□□□□ -1.19
RIPK4P57078 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RIPK4P57078 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
RIPK4P57078 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RIPK4P57078 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.6□□□□□ -1.19
RIPK4P57078 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
RIPK4P57078 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RIPK4P57078 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC7.6□□□□□ -1.19
RIPK4P57078 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RIPK4P57078 TMSB4XP4-201ENST00000323496 618 ntBASIC7.6□□□□□ -1.19
RIPK4P57078 AL159987.1-201ENST00000347911 293 ntBASIC7.6□□□□□ -1.19
RIPK4P57078 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RIPK4P57078 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RIPK4P57078 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RIPK4P57078 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RIPK4P57078 AC093155.2-201ENST00000420734 937 ntBASIC7.6□□□□□ -1.19
RIPK4P57078 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
RIPK4P57078 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RIPK4P57078 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.6□□□□□ -1.19
RIPK4P57078 USP24P1-201ENST00000433802 779 ntBASIC7.6□□□□□ -1.19
RIPK4P57078 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC7.6□□□□□ -1.19
RIPK4P57078 RNU1-88P-201ENST00000459274 128 ntBASIC7.6□□□□□ -1.19
RIPK4P57078 RPL32P33-201ENST00000487023 394 ntBASIC7.6□□□□□ -1.19
RIPK4P57078 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
RIPK4P57078 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms