Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.55□□□□□ -1.36
COPB1P53618 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.55□□□□□ -1.36
COPB1P53618 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.55□□□□□ -1.36
COPB1P53618 OR56A7P-201ENST00000524865 941 ntBASIC6.55□□□□□ -1.36
COPB1P53618 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.55□□□□□ -1.36
COPB1P53618 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.55□□□□□ -1.36
COPB1P53618 AL136520.1-202ENST00000555494 763 ntBASIC6.55□□□□□ -1.36
COPB1P53618 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.55□□□□□ -1.36
COPB1P53618 AC007346.2-201ENST00000564816 892 ntBASIC6.55□□□□□ -1.36
COPB1P53618 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC6.55□□□□□ -1.36
COPB1P53618 AP005136.2-201ENST00000583253 1049 ntBASIC6.55□□□□□ -1.36
COPB1P53618 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.55□□□□□ -1.36
COPB1P53618 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.55□□□□□ -1.36
COPB1P53618 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.55□□□□□ -1.36
COPB1P53618 AC006115.2-201ENST00000596823 202 ntBASIC6.55□□□□□ -1.36
COPB1P53618 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.55□□□□□ -1.36
COPB1P53618 AC025857.2-201ENST00000602711 238 ntBASIC6.55□□□□□ -1.36
COPB1P53618 AC011458.1-201ENST00000604034 617 ntBASIC6.55□□□□□ -1.36
COPB1P53618 AC022387.2-201ENST00000604050 448 ntBASIC6.55□□□□□ -1.36
COPB1P53618 AC009237.12-201ENST00000604755 742 ntBASIC6.55□□□□□ -1.36
COPB1P53618 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COPB1P53618 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.55□□□□□ -1.36
COPB1P53618 CXADRP3-202ENST00000617265 1100 ntBASIC6.55□□□□□ -1.36
COPB1P53618 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.55□□□□□ -1.36
COPB1P53618 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COPB1P53618 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.55□□□□□ -1.36
COPB1P53618 AC093297.3-201ENST00000607056 2517 ntBASIC6.55□□□□□ -1.36
COPB1P53618 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
COPB1P53618 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
COPB1P53618 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COPB1P53618 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COPB1P53618 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.54□□□□□ -1.36
COPB1P53618 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.54□□□□□ -1.36
COPB1P53618 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COPB1P53618 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.54□□□□□ -1.36
COPB1P53618 LINC01613-201ENST00000561476 2780 ntBASIC6.54□□□□□ -1.36
COPB1P53618 AC025470.1-201ENST00000510053 2032 ntBASIC6.54□□□□□ -1.36
COPB1P53618 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
COPB1P53618 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
COPB1P53618 AC087516.1-201ENST00000561236 2428 ntBASIC6.54□□□□□ -1.36
COPB1P53618 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.54□□□□□ -1.36
COPB1P53618 RNA5SP110-201ENST00000362638 115 ntBASIC6.54□□□□□ -1.36
COPB1P53618 RNA5SP211-201ENST00000365516 117 ntBASIC6.54□□□□□ -1.36
COPB1P53618 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COPB1P53618 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
COPB1P53618 AL139805.1-201ENST00000407837 289 ntBASIC6.54□□□□□ -1.36
COPB1P53618 RPS7P8-201ENST00000418311 581 ntBASIC6.54□□□□□ -1.36
COPB1P53618 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.54□□□□□ -1.36
COPB1P53618 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
COPB1P53618 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.54□□□□□ -1.36
COPB1P53618 AL451063.1-201ENST00000450164 1133 ntBASIC6.54□□□□□ -1.36
COPB1P53618 AL603882.1-201ENST00000463059 681 ntBASIC6.54□□□□□ -1.36
COPB1P53618 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.54□□□□□ -1.36
COPB1P53618 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.54□□□□□ -1.36
COPB1P53618 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.54□□□□□ -1.36
COPB1P53618 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.54□□□□□ -1.36
COPB1P53618 AC090424.1-201ENST00000535243 736 ntBASIC6.54□□□□□ -1.36
COPB1P53618 AC126365.2-201ENST00000580630 379 ntBASIC6.54□□□□□ -1.36
COPB1P53618 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.54□□□□□ -1.36
COPB1P53618 AC060780.2-201ENST00000589047 198 ntBASIC6.54□□□□□ -1.36
COPB1P53618 SMIM12P1-201ENST00000603004 274 ntBASIC6.54□□□□□ -1.36
COPB1P53618 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.54□□□□□ -1.36
COPB1P53618 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.54□□□□□ -1.36
COPB1P53618 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
COPB1P53618 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.54□□□□□ -1.36
COPB1P53618 FO681491.1-202ENST00000623392 737 ntBASIC6.54□□□□□ -1.36
COPB1P53618 AL357562.1-201ENST00000624911 609 ntBASIC6.54□□□□□ -1.36
COPB1P53618 AC106858.1-201ENST00000637497 429 ntBASIC6.54□□□□□ -1.36
COPB1P53618 AL591135.1-201ENST00000401578 5914 ntBASIC6.54□□□□□ -1.36
COPB1P53618 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
COPB1P53618 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.54□□□□□ -1.36
COPB1P53618 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COPB1P53618 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.54□□□□□ -1.36
COPB1P53618 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.54□□□□□ -1.36
COPB1P53618 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.54□□□□□ -1.36
COPB1P53618 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COPB1P53618 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.53□□□□□ -1.36
COPB1P53618 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.53□□□□□ -1.36
COPB1P53618 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COPB1P53618 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COPB1P53618 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COPB1P53618 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.53□□□□□ -1.36
COPB1P53618 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COPB1P53618 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.53□□□□□ -1.36
COPB1P53618 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
COPB1P53618 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
COPB1P53618 RN7SKP108-201ENST00000411367 328 ntBASIC6.53□□□□□ -1.36
COPB1P53618 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.53□□□□□ -1.36
COPB1P53618 RPL12P12-201ENST00000424633 501 ntBASIC6.53□□□□□ -1.36
COPB1P53618 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC6.53□□□□□ -1.36
COPB1P53618 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.53□□□□□ -1.36
COPB1P53618 RPL17P35-201ENST00000432217 549 ntBASIC6.53□□□□□ -1.36
COPB1P53618 GXYLT1P1-201ENST00000446657 490 ntBASIC6.53□□□□□ -1.36
COPB1P53618 FRG2FP-204ENST00000453982 852 ntBASIC6.53□□□□□ -1.36
COPB1P53618 AC118758.1-202ENST00000454719 225 ntBASIC6.53□□□□□ -1.36
COPB1P53618 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.53□□□□□ -1.36
COPB1P53618 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.53□□□□□ -1.36
COPB1P53618 AC104164.1-201ENST00000460282 590 ntBASIC6.53□□□□□ -1.36
COPB1P53618 RPL38P3-201ENST00000484463 213 ntBASIC6.53□□□□□ -1.36
COPB1P53618 RN7SL568P-201ENST00000493069 298 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms