Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.07□□□□□ -1.44
HTTP42858 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HTTP42858 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.07□□□□□ -1.44
HTTP42858 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.07□□□□□ -1.44
HTTP42858 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.07□□□□□ -1.44
HTTP42858 RPL21P129-201ENST00000491732 478 ntBASIC6.07□□□□□ -1.44
HTTP42858 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.07□□□□□ -1.44
HTTP42858 RN7SKP122-201ENST00000515923 296 ntBASIC6.07□□□□□ -1.44
HTTP42858 AL121594.2-201ENST00000541658 472 ntBASIC6.07□□□□□ -1.44
HTTP42858 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.07□□□□□ -1.44
HTTP42858 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.07□□□□□ -1.44
HTTP42858 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC6.07□□□□□ -1.44
HTTP42858 AL132640.2-201ENST00000559968 1698 ntBASIC6.07□□□□□ -1.44
HTTP42858 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 SIPA1L2-201ENST00000262861 6555 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
HTTP42858 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.07□□□□□ -1.44
HTTP42858 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.07□□□□□ -1.44
HTTP42858 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.07□□□□□ -1.44
HTTP42858 MTND6P2-201ENST00000512226 524 ntBASIC6.07□□□□□ -1.44
HTTP42858 MIR4284-201ENST00000578924 81 ntBASIC6.07□□□□□ -1.44
HTTP42858 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 AL731556.1-201ENST00000394628 3711 ntBASIC6.07□□□□□ -1.44
HTTP42858 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 PIK3C2B-202ENST00000367187 7686 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.07□□□□□ -1.44
HTTP42858 OLMALINC-203ENST00000641087 3779 ntBASIC6.07□□□□□ -1.44
HTTP42858 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HTTP42858 COL4A6-208ENST00000538570 6528 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 AC114876.1-201ENST00000490962 1366 ntBASIC6.06□□□□□ -1.44
HTTP42858 PKD1L3-201ENST00000620267 5199 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HTTP42858 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.06□□□□□ -1.44
HTTP42858 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.06□□□□□ -1.44
HTTP42858 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HTTP42858 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
HTTP42858 AC079741.1-201ENST00000321498 212 ntBASIC6.06□□□□□ -1.44
HTTP42858 RNA5SP113-201ENST00000410486 84 ntBASIC6.06□□□□□ -1.44
HTTP42858 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HTTP42858 AC111000.3-201ENST00000508057 576 ntBASIC6.06□□□□□ -1.44
HTTP42858 GLRXP2-201ENST00000555594 321 ntBASIC6.06□□□□□ -1.44
HTTP42858 AC027334.1-201ENST00000603257 310 ntBASIC6.06□□□□□ -1.44
HTTP42858 HIRAP1-201ENST00000605318 787 ntBASIC6.06□□□□□ -1.44
HTTP42858 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.06□□□□□ -1.44
HTTP42858 MLECP1-201ENST00000615893 709 ntBASIC6.06□□□□□ -1.44
HTTP42858 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.06□□□□□ -1.44
HTTP42858 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HTTP42858 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HTTP42858 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HTTP42858 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
HTTP42858 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HTTP42858 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HTTP42858 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HTTP42858 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HTTP42858 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
HTTP42858 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HTTP42858 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HTTP42858 TNS3-201ENST00000311160 7618 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HTTP42858 RN7SKP227-201ENST00000364445 330 ntBASIC6.06□□□□□ -1.44
HTTP42858 RPSAP35-201ENST00000413753 818 ntBASIC6.06□□□□□ -1.44
HTTP42858 AC119751.6-201ENST00000416712 186 ntBASIC6.06□□□□□ -1.44
HTTP42858 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.06□□□□□ -1.44
HTTP42858 GSTM5P1-201ENST00000434751 660 ntBASIC6.06□□□□□ -1.44
HTTP42858 GAPDHP25-201ENST00000447061 1001 ntBASIC6.06□□□□□ -1.44
HTTP42858 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.06□□□□□ -1.44
HTTP42858 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.06□□□□□ -1.44
HTTP42858 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.06□□□□□ -1.44
HTTP42858 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.06□□□□□ -1.44
HTTP42858 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.06□□□□□ -1.44
HTTP42858 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.06□□□□□ -1.44
HTTP42858 NUP210L-203ENST00000368559 5889 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
HTTP42858 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HTTP42858 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.06□□□□□ -1.44
HTTP42858 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.06□□□□□ -1.44
HTTP42858 ACOT11-202ENST00000371316 6369 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
HTTP42858 TMEM178B-202ENST00000565468 10558 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
HTTP42858 TMEM178B-203ENST00000610315 10552 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
HTTP42858 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HTTP42858 RN7SKP151-201ENST00000410230 316 ntBASIC6.05□□□□□ -1.44
HTTP42858 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.05□□□□□ -1.44
HTTP42858 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.05□□□□□ -1.44
HTTP42858 AL731534.1-201ENST00000434711 269 ntBASIC6.05□□□□□ -1.44
HTTP42858 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HTTP42858 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.05□□□□□ -1.44
HTTP42858 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
HTTP42858 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.05□□□□□ -1.44
HTTP42858 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
HTTP42858 RPL26P30-202ENST00000602923 645 ntBASIC6.05□□□□□ -1.44
HTTP42858 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HTTP42858 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.05□□□□□ -1.44
HTTP42858 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms