Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RNU6-956P-201ENST00000458868 103 ntBASIC8.06□□□□□ -1.12
RFX1P22670 TUBBP11-201ENST00000472255 252 ntBASIC8.06□□□□□ -1.12
RFX1P22670 PPP1R2P6-201ENST00000478565 588 ntBASIC8.06□□□□□ -1.12
RFX1P22670 AC073522.1-201ENST00000483312 377 ntBASIC8.06□□□□□ -1.12
RFX1P22670 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC8.06□□□□□ -1.12
RFX1P22670 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC8.06□□□□□ -1.12
RFX1P22670 NRON-201ENST00000517270 370 ntBASIC8.06□□□□□ -1.12
RFX1P22670 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC8.06□□□□□ -1.12
RFX1P22670 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC8.06□□□□□ -1.12
RFX1P22670 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RFX1P22670 AP002812.4-201ENST00000532139 286 ntBASIC8.06□□□□□ -1.12
RFX1P22670 PHBP2-201ENST00000532859 806 ntBASIC8.06□□□□□ -1.12
RFX1P22670 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC8.06□□□□□ -1.12
RFX1P22670 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC8.06□□□□□ -1.12
RFX1P22670 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC8.06□□□□□ -1.12
RFX1P22670 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC8.06□□□□□ -1.12
RFX1P22670 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC8.06□□□□□ -1.12
RFX1P22670 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC8.06□□□□□ -1.12
RFX1P22670 IGHV1OR15-3-201ENST00000564926 351 ntBASIC8.06□□□□□ -1.12
RFX1P22670 AC105275.2-201ENST00000567907 711 ntBASIC8.06□□□□□ -1.12
RFX1P22670 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC8.06□□□□□ -1.12
RFX1P22670 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
RFX1P22670 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC8.06□□□□□ -1.12
RFX1P22670 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC8.06□□□□□ -1.12
RFX1P22670 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC8.06□□□□□ -1.12
RFX1P22670 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC8.06□□□□□ -1.12
RFX1P22670 AC091932.2-201ENST00000623014 291 ntBASIC8.06□□□□□ -1.12
RFX1P22670 AC004836.1-201ENST00000623032 634 ntBASIC8.06□□□□□ -1.12
RFX1P22670 SNORA43.5-201ENST00000631270 138 ntBASIC8.06□□□□□ -1.12
RFX1P22670 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC8.06□□□□□ -1.12
RFX1P22670 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RFX1P22670 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
RFX1P22670 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RFX1P22670 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
RFX1P22670 IMMTP1-201ENST00000435590 2219 ntBASIC8.06□□□□□ -1.12
RFX1P22670 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RFX1P22670 AL603750.1-201ENST00000624216 1717 ntBASIC8.06□□□□□ -1.12
RFX1P22670 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RFX1P22670 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
RFX1P22670 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
RFX1P22670 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RFX1P22670 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC8.06□□□□□ -1.12
RFX1P22670 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
RFX1P22670 MAPK6PS3-201ENST00000403865 2162 ntBASIC8.05□□□□□ -1.12
RFX1P22670 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.05□□□□□ -1.12
RFX1P22670 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
RFX1P22670 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RFX1P22670 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.05□□□□□ -1.12
RFX1P22670 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RFX1P22670 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RFX1P22670 AC106872.5-201ENST00000508856 1416 ntBASIC8.05□□□□□ -1.12
RFX1P22670 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
RFX1P22670 BRAFP1-201ENST00000445336 2703 ntBASIC8.05□□□□□ -1.12
RFX1P22670 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RFX1P22670 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RFX1P22670 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
RFX1P22670 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RFX1P22670 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
RFX1P22670 AP005139.1-201ENST00000580702 1647 ntBASIC8.05□□□□□ -1.12
RFX1P22670 RNA5SP448-201ENST00000363151 111 ntBASIC8.05□□□□□ -1.12
RFX1P22670 RNU6-621P-201ENST00000364752 109 ntBASIC8.05□□□□□ -1.12
RFX1P22670 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RFX1P22670 SSX6-201ENST00000376932 562 ntBASIC8.05□□□□□ -1.12
RFX1P22670 RPL24P7-201ENST00000399435 453 ntBASIC8.05□□□□□ -1.12
RFX1P22670 IL6-203ENST00000401651 539 ntTSL 2 BASIC8.05□□□□□ -1.12
RFX1P22670 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RFX1P22670 OFD1P2Y-201ENST00000421895 1149 ntBASIC8.05□□□□□ -1.12
RFX1P22670 MED14P1-201ENST00000430517 648 ntBASIC8.05□□□□□ -1.12
RFX1P22670 HMGB1P45-201ENST00000435986 653 ntBASIC8.05□□□□□ -1.12
RFX1P22670 AC013403.1-201ENST00000436954 263 ntBASIC8.05□□□□□ -1.12
RFX1P22670 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC8.05□□□□□ -1.12
RFX1P22670 AC114755.4-201ENST00000439114 443 ntBASIC8.05□□□□□ -1.12
RFX1P22670 MTND2P20-201ENST00000440805 661 ntBASIC8.05□□□□□ -1.12
RFX1P22670 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC8.05□□□□□ -1.12
RFX1P22670 CDC42P2-201ENST00000448566 569 ntBASIC8.05□□□□□ -1.12
RFX1P22670 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC8.05□□□□□ -1.12
RFX1P22670 PNPLA4P1-201ENST00000458328 305 ntBASIC8.05□□□□□ -1.12
RFX1P22670 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC8.05□□□□□ -1.12
RFX1P22670 AC021205.1-201ENST00000468797 348 ntBASIC8.05□□□□□ -1.12
RFX1P22670 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC8.05□□□□□ -1.12
RFX1P22670 VPS26AP1-201ENST00000483197 979 ntBASIC8.05□□□□□ -1.12
RFX1P22670 AF305872.1-201ENST00000485217 471 ntBASIC8.05□□□□□ -1.12
RFX1P22670 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RFX1P22670 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC8.05□□□□□ -1.12
RFX1P22670 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC8.05□□□□□ -1.12
RFX1P22670 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC8.05□□□□□ -1.12
RFX1P22670 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC8.05□□□□□ -1.12
RFX1P22670 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC8.05□□□□□ -1.12
RFX1P22670 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC8.05□□□□□ -1.12
RFX1P22670 PDCL3P1-201ENST00000534575 734 ntBASIC8.05□□□□□ -1.12
RFX1P22670 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC8.05□□□□□ -1.12
RFX1P22670 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC8.05□□□□□ -1.12
RFX1P22670 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC8.05□□□□□ -1.12
RFX1P22670 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC8.05□□□□□ -1.12
RFX1P22670 DNM1P31-201ENST00000564149 696 ntBASIC8.05□□□□□ -1.12
RFX1P22670 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC8.05□□□□□ -1.12
RFX1P22670 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC8.05□□□□□ -1.12
RFX1P22670 RN7SL131P-201ENST00000579043 256 ntBASIC8.05□□□□□ -1.12
RFX1P22670 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC8.05□□□□□ -1.12
RFX1P22670 OR7E19P-202ENST00000589942 844 ntBASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms