Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RN7SKP67-201ENST00000515905 235 ntBASIC6.24□□□□□ -1.41
PDGFRAP16234 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.24□□□□□ -1.41
PDGFRAP16234 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.24□□□□□ -1.41
PDGFRAP16234 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.24□□□□□ -1.41
PDGFRAP16234 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.24□□□□□ -1.41
PDGFRAP16234 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.24□□□□□ -1.41
PDGFRAP16234 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.24□□□□□ -1.41
PDGFRAP16234 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.24□□□□□ -1.41
PDGFRAP16234 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFRAP16234 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.24□□□□□ -1.41
PDGFRAP16234 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.24□□□□□ -1.41
PDGFRAP16234 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.24□□□□□ -1.41
PDGFRAP16234 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.24□□□□□ -1.41
PDGFRAP16234 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.24□□□□□ -1.41
PDGFRAP16234 MIR6861-201ENST00000618657 64 ntBASIC6.24□□□□□ -1.41
PDGFRAP16234 AC024884.1-201ENST00000620583 399 ntBASIC6.24□□□□□ -1.41
PDGFRAP16234 AL136228.1-201ENST00000622221 319 ntBASIC6.24□□□□□ -1.41
PDGFRAP16234 SNX18P12-201ENST00000624821 759 ntBASIC6.24□□□□□ -1.41
PDGFRAP16234 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFRAP16234 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFRAP16234 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFRAP16234 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFRAP16234 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFRAP16234 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDGFRAP16234 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.24□□□□□ -1.41
PDGFRAP16234 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
PDGFRAP16234 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFRAP16234 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
PDGFRAP16234 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFRAP16234 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.23□□□□□ -1.41
PDGFRAP16234 AC130304.1-201ENST00000622942 2385 ntBASIC6.23□□□□□ -1.41
PDGFRAP16234 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFRAP16234 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.23□□□□□ -1.41
PDGFRAP16234 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFRAP16234 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFRAP16234 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
PDGFRAP16234 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PDGFRAP16234 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PDGFRAP16234 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFRAP16234 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.23□□□□□ -1.41
PDGFRAP16234 TRGV7-201ENST00000427089 353 ntBASIC6.23□□□□□ -1.41
PDGFRAP16234 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.23□□□□□ -1.41
PDGFRAP16234 UBE2V2P1-201ENST00000434717 398 ntBASIC6.23□□□□□ -1.41
PDGFRAP16234 RPS3AP38-201ENST00000435889 763 ntBASIC6.23□□□□□ -1.41
PDGFRAP16234 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.23□□□□□ -1.41
PDGFRAP16234 AC005077.1-201ENST00000449226 375 ntBASIC6.23□□□□□ -1.41
PDGFRAP16234 AL603882.1-201ENST00000463059 681 ntBASIC6.23□□□□□ -1.41
PDGFRAP16234 PFN1P6-201ENST00000476786 399 ntBASIC6.23□□□□□ -1.41
PDGFRAP16234 TRBV5-2-201ENST00000489095 273 ntBASIC6.23□□□□□ -1.41
PDGFRAP16234 OR2A3P-201ENST00000493774 953 ntBASIC6.23□□□□□ -1.41
PDGFRAP16234 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.23□□□□□ -1.41
PDGFRAP16234 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.23□□□□□ -1.41
PDGFRAP16234 TOMM22P4-201ENST00000511318 336 ntBASIC6.23□□□□□ -1.41
PDGFRAP16234 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.23□□□□□ -1.41
PDGFRAP16234 AP003396.4-201ENST00000527574 265 ntBASIC6.23□□□□□ -1.41
PDGFRAP16234 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PDGFRAP16234 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFRAP16234 AC007956.1-201ENST00000555623 542 ntBASIC6.23□□□□□ -1.41
PDGFRAP16234 AC135626.1-201ENST00000556983 435 ntBASIC6.23□□□□□ -1.41
PDGFRAP16234 LINC00556-201ENST00000569603 412 ntBASIC6.23□□□□□ -1.41
PDGFRAP16234 AC060766.1-201ENST00000590824 627 ntBASIC6.23□□□□□ -1.41
PDGFRAP16234 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.23□□□□□ -1.41
PDGFRAP16234 AL021918.2-201ENST00000613415 194 ntBASIC6.23□□□□□ -1.41
PDGFRAP16234 AC245014.3-201ENST00000618589 347 ntBASIC6.23□□□□□ -1.41
PDGFRAP16234 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.23□□□□□ -1.41
PDGFRAP16234 AC022400.9-201ENST00000623633 273 ntBASIC6.23□□□□□ -1.41
PDGFRAP16234 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.23□□□□□ -1.41
PDGFRAP16234 MAPK10-350ENST00000641777 965 ntBASIC6.23□□□□□ -1.41
PDGFRAP16234 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFRAP16234 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFRAP16234 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
PDGFRAP16234 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFRAP16234 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFRAP16234 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
PDGFRAP16234 AL161756.3-201ENST00000641216 2071 ntBASIC6.22□□□□□ -1.41
PDGFRAP16234 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.22□□□□□ -1.41
PDGFRAP16234 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PDGFRAP16234 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFRAP16234 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFRAP16234 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.22□□□□□ -1.41
PDGFRAP16234 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
PDGFRAP16234 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFRAP16234 AP000432.2-201ENST00000624164 2048 ntBASIC6.22□□□□□ -1.41
PDGFRAP16234 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PDGFRAP16234 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PDGFRAP16234 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PDGFRAP16234 RNFT1P3-201ENST00000340898 1052 ntBASIC6.22□□□□□ -1.41
PDGFRAP16234 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.22□□□□□ -1.41
PDGFRAP16234 AL096711.1-201ENST00000404780 554 ntBASIC6.22□□□□□ -1.41
PDGFRAP16234 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.22□□□□□ -1.41
PDGFRAP16234 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFRAP16234 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.22□□□□□ -1.41
PDGFRAP16234 AC066692.1-201ENST00000421721 457 ntBASIC6.22□□□□□ -1.41
PDGFRAP16234 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.22□□□□□ -1.41
PDGFRAP16234 AL445928.1-201ENST00000435545 222 ntBASIC6.22□□□□□ -1.41
PDGFRAP16234 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFRAP16234 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFRAP16234 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.22□□□□□ -1.41
PDGFRAP16234 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFRAP16234 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms