Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC090220.1-201ENST00000593078 1699 ntBASIC6.91□□□□□ -1.3
TOP1P11387 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
TOP1P11387 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TOP1P11387 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TOP1P11387 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
TOP1P11387 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TOP1P11387 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
TOP1P11387 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.91□□□□□ -1.3
TOP1P11387 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.91□□□□□ -1.3
TOP1P11387 snoU13.29-201ENST00000459370 104 ntBASIC6.91□□□□□ -1.3
TOP1P11387 AC007998.1-201ENST00000474156 672 ntBASIC6.91□□□□□ -1.3
TOP1P11387 GAPDHP71-201ENST00000511530 1003 ntBASIC6.91□□□□□ -1.3
TOP1P11387 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.91□□□□□ -1.3
TOP1P11387 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.91□□□□□ -1.3
TOP1P11387 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.91□□□□□ -1.3
TOP1P11387 OR5D2P-201ENST00000524390 911 ntBASIC6.91□□□□□ -1.3
TOP1P11387 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.91□□□□□ -1.3
TOP1P11387 TXNP4-201ENST00000575018 310 ntBASIC6.91□□□□□ -1.3
TOP1P11387 MIR3614-201ENST00000581261 86 ntBASIC6.91□□□□□ -1.3
TOP1P11387 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TOP1P11387 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
TOP1P11387 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.91□□□□□ -1.3
TOP1P11387 AP002512.4-202ENST00000641599 4530 ntBASIC6.91□□□□□ -1.3
TOP1P11387 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TOP1P11387 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
TOP1P11387 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.91□□□□□ -1.3
TOP1P11387 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
TOP1P11387 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TOP1P11387 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
TOP1P11387 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.91□□□□□ -1.3
TOP1P11387 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TOP1P11387 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.9□□□□□ -1.3
TOP1P11387 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
TOP1P11387 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TOP1P11387 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.9□□□□□ -1.3
TOP1P11387 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TOP1P11387 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.9□□□□□ -1.3
TOP1P11387 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TOP1P11387 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TOP1P11387 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TOP1P11387 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
TOP1P11387 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.9□□□□□ -1.3
TOP1P11387 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
TOP1P11387 OR7E101P-201ENST00000400428 513 ntBASIC6.9□□□□□ -1.3
TOP1P11387 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.9□□□□□ -1.3
TOP1P11387 AC092651.1-201ENST00000426110 312 ntBASIC6.9□□□□□ -1.3
TOP1P11387 AC126120.1-201ENST00000431082 470 ntBASIC6.9□□□□□ -1.3
TOP1P11387 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.9□□□□□ -1.3
TOP1P11387 AL663074.2-201ENST00000440621 479 ntBASIC6.9□□□□□ -1.3
TOP1P11387 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.9□□□□□ -1.3
TOP1P11387 UBFD1P1-201ENST00000473259 814 ntBASIC6.9□□□□□ -1.3
TOP1P11387 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.9□□□□□ -1.3
TOP1P11387 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TOP1P11387 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.9□□□□□ -1.3
TOP1P11387 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.9□□□□□ -1.3
TOP1P11387 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
TOP1P11387 AC091078.2-201ENST00000557145 559 ntBASIC6.9□□□□□ -1.3
TOP1P11387 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.9□□□□□ -1.3
TOP1P11387 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.9□□□□□ -1.3
TOP1P11387 GARSP1-201ENST00000570895 719 ntBASIC6.9□□□□□ -1.3
TOP1P11387 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.9□□□□□ -1.3
TOP1P11387 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.9□□□□□ -1.3
TOP1P11387 AC008521.2-201ENST00000591021 259 ntBASIC6.9□□□□□ -1.3
TOP1P11387 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TOP1P11387 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TOP1P11387 AP001267.4-201ENST00000602598 545 ntBASIC6.9□□□□□ -1.3
TOP1P11387 FAM27E4-201ENST00000605259 342 ntBASIC6.9□□□□□ -1.3
TOP1P11387 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TOP1P11387 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.9□□□□□ -1.3
TOP1P11387 AP005431.1-201ENST00000618479 319 ntBASIC6.9□□□□□ -1.3
TOP1P11387 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.9□□□□□ -1.3
TOP1P11387 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.9□□□□□ -1.3
TOP1P11387 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.9□□□□□ -1.3
TOP1P11387 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
TOP1P11387 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
TOP1P11387 AC137056.2-201ENST00000624055 1958 ntBASIC6.89□□□□□ -1.31
TOP1P11387 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TOP1P11387 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.89□□□□□ -1.31
TOP1P11387 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TOP1P11387 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
TOP1P11387 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TOP1P11387 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
TOP1P11387 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
TOP1P11387 RNA5SP122-201ENST00000384457 108 ntBASIC6.89□□□□□ -1.31
TOP1P11387 RNA5SP284-201ENST00000384547 118 ntBASIC6.89□□□□□ -1.31
TOP1P11387 AL031985.1-201ENST00000392713 418 ntBASIC6.89□□□□□ -1.31
TOP1P11387 RPS3AP2-201ENST00000407190 754 ntBASIC6.89□□□□□ -1.31
TOP1P11387 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.89□□□□□ -1.31
TOP1P11387 EEF1B2P8-201ENST00000414101 671 ntBASIC6.89□□□□□ -1.31
TOP1P11387 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.89□□□□□ -1.31
TOP1P11387 MTND6P12-201ENST00000428247 522 ntBASIC6.89□□□□□ -1.31
TOP1P11387 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.89□□□□□ -1.31
TOP1P11387 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.89□□□□□ -1.31
TOP1P11387 AL445665.1-202ENST00000452436 324 ntBASIC6.89□□□□□ -1.31
TOP1P11387 PFN1P6-201ENST00000476786 399 ntBASIC6.89□□□□□ -1.31
TOP1P11387 AC099521.1-201ENST00000482557 334 ntBASIC6.89□□□□□ -1.31
TOP1P11387 RN7SKP288-201ENST00000516227 268 ntBASIC6.89□□□□□ -1.31
TOP1P11387 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.89□□□□□ -1.31
TOP1P11387 HMGN2P36-201ENST00000529541 409 ntBASIC6.89□□□□□ -1.31
TOP1P11387 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms