Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CSB-PGBD3P0DP91 DDX43P1-201ENST00000510713 1763 ntBASIC8.96□□□□□ -0.97
CSB-PGBD3P0DP91 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
CSB-PGBD3P0DP91 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
CSB-PGBD3P0DP91 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.97
CSB-PGBD3P0DP91 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC8.96□□□□□ -0.97
CSB-PGBD3P0DP91 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
CSB-PGBD3P0DP91 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC8.96□□□□□ -0.97
CSB-PGBD3P0DP91 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CSB-PGBD3P0DP91 IL24-207ENST00000611909 1621 ntTSL 3 BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 Y_RNA.194-201ENST00000363985 102 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 RNU6-867P-201ENST00000364956 107 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 RNU1-84P-201ENST00000365447 164 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 AC003045.1-201ENST00000398779 713 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 GCNT1P4-201ENST00000404096 329 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 AL355379.1-201ENST00000405542 640 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 AL512326.1-201ENST00000443050 721 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 GAPDHP33-201ENST00000443168 1013 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 MTCYBP3-201ENST00000445588 1137 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 AL929288.2-201ENST00000446368 407 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 AC094085.1-201ENST00000468914 584 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 MTCO3P7-201ENST00000510008 774 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 AP003461.1-201ENST00000528866 78 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 AC021483.2-201ENST00000567415 758 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 AC106734.1-201ENST00000568646 663 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 RN7SL366P-201ENST00000577957 292 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 IGKV2OR2-1-201ENST00000605129 304 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 AL359715.5-201ENST00000623431 443 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 OR8B1P-202ENST00000641132 1178 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 SLC10A5P1-201ENST00000379063 1306 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 AC011008.2-201ENST00000624866 3352 ntBASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC8.96□□□□□ -0.98
CSB-PGBD3P0DP91 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 SPATA31C2-201ENST00000324915 3777 ntBASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 SNORA38B-201ENST00000363524 131 ntBASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 RPL10P10-201ENST00000403509 664 ntBASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 SNORA77.2-201ENST00000408571 112 ntBASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 HSD17B7P1-201ENST00000412419 1017 ntBASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 GCA-203ENST00000429691 824 ntTSL 3 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 AL020997.1-201ENST00000446554 349 ntBASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 RN7SL221P-201ENST00000466190 281 ntBASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 AC134050.1-201ENST00000495088 933 ntBASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 PFN2-217ENST00000498307 556 ntTSL 4 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 EEF1B2P2-201ENST00000519625 676 ntBASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 AC022880.1-201ENST00000534017 973 ntBASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 AC013283.1-201ENST00000557282 492 ntBASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms