Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PDGFAP04085 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PDGFAP04085 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PDGFAP04085 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
PDGFAP04085 AC107980.1-201ENST00000558671 3355 ntBASIC7.19□□□□□ -1.26
PDGFAP04085 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PDGFAP04085 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PDGFAP04085 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDGFAP04085 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
PDGFAP04085 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC7.18□□□□□ -1.26
PDGFAP04085 CDYLP1-201ENST00000419017 1458 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.18□□□□□ -1.26
PDGFAP04085 AC009237.3-203ENST00000442128 3551 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.18□□□□□ -1.26
PDGFAP04085 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PDGFAP04085 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDGFAP04085 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.18□□□□□ -1.26
PDGFAP04085 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC7.18□□□□□ -1.26
PDGFAP04085 AC012360.3-201ENST00000610036 3449 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDGFAP04085 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PDGFAP04085 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDGFAP04085 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC7.18□□□□□ -1.26
PDGFAP04085 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC7.18□□□□□ -1.26
PDGFAP04085 RNU6-660P-201ENST00000364566 109 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 RNU6-348P-201ENST00000384386 107 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 RNU6-114P-201ENST00000384704 105 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 MIR16-1-201ENST00000385271 89 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDGFAP04085 RN7SKP30-201ENST00000411373 334 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 AL161742.1-201ENST00000418154 584 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 AC006455.4-201ENST00000418297 528 ntTSL 4 BASIC7.18□□□□□ -1.26
PDGFAP04085 AL358942.1-201ENST00000418595 1178 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 UBTFL3-201ENST00000418934 1024 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC7.18□□□□□ -1.26
PDGFAP04085 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.18□□□□□ -1.26
PDGFAP04085 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC7.18□□□□□ -1.26
PDGFAP04085 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC7.18□□□□□ -1.26
PDGFAP04085 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC7.18□□□□□ -1.26
PDGFAP04085 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PDGFAP04085 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC7.18□□□□□ -1.26
PDGFAP04085 ELOCP10-201ENST00000440624 327 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC7.18□□□□□ -1.26
PDGFAP04085 UBE2V1P7-201ENST00000446395 340 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 AL034418.1-201ENST00000448675 860 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.18□□□□□ -1.26
PDGFAP04085 AC073188.4-201ENST00000450077 528 ntTSL 4 BASIC7.18□□□□□ -1.26
PDGFAP04085 AL591379.2-201ENST00000450223 397 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.18□□□□□ -1.26
PDGFAP04085 OR9M1P-201ENST00000459641 921 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 RN7SL19P-201ENST00000462522 306 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 AC008620.1-201ENST00000468453 592 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 UBTFL6-201ENST00000477929 1024 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 RPS4XP15-201ENST00000489210 795 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC7.18□□□□□ -1.26
PDGFAP04085 AC105391.1-201ENST00000503155 1045 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC7.18□□□□□ -1.26
PDGFAP04085 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC7.18□□□□□ -1.26
PDGFAP04085 HMGB1P44-201ENST00000508597 572 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC7.18□□□□□ -1.26
PDGFAP04085 OR5AK1P-201ENST00000524837 922 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC7.18□□□□□ -1.26
PDGFAP04085 AP002812.4-201ENST00000532139 286 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 AC117498.2-202ENST00000549864 473 ntTSL 2 BASIC7.18□□□□□ -1.26
PDGFAP04085 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.18□□□□□ -1.26
PDGFAP04085 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC7.18□□□□□ -1.26
PDGFAP04085 COX6CP11-201ENST00000555293 229 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 AC092718.4-201ENST00000566639 716 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC7.18□□□□□ -1.26
PDGFAP04085 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC7.18□□□□□ -1.26
PDGFAP04085 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
PDGFAP04085 AC027796.1-201ENST00000575593 512 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC7.18□□□□□ -1.26
PDGFAP04085 AP005262.1-201ENST00000582646 997 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC7.18□□□□□ -1.26
PDGFAP04085 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC7.18□□□□□ -1.26
PDGFAP04085 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC7.18□□□□□ -1.26
PDGFAP04085 ELOCP34-201ENST00000604436 327 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 AL022154.1-201ENST00000604698 785 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 AL159169.3-201ENST00000608871 561 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 RNVU1-19-201ENST00000613023 167 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 FAM27E3-202ENST00000614611 340 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
PDGFAP04085 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
PDGFAP04085 CASC19-264ENST00000641912 1184 ntBASIC7.18□□□□□ -1.26
PDGFAP04085 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.18□□□□□ -1.26
PDGFAP04085 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDGFAP04085 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
PDGFAP04085 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
PDGFAP04085 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDGFAP04085 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PDGFAP04085 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PDGFAP04085 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
PDGFAP04085 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDGFAP04085 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PDGFAP04085 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PDGFAP04085 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
PDGFAP04085 AC007938.1-201ENST00000562524 2902 ntBASIC7.17□□□□□ -1.26
PDGFAP04085 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms