Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDGFBP01127 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
PDGFBP01127 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDGFBP01127 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDGFBP01127 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDGFBP01127 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.07□□□□□ -1.44
PDGFBP01127 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.07□□□□□ -1.44
PDGFBP01127 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDGFBP01127 YES1P1-201ENST00000418510 1628 ntBASIC6.07□□□□□ -1.44
PDGFBP01127 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.07□□□□□ -1.44
PDGFBP01127 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFBP01127 AC010624.4-201ENST00000597606 1351 ntBASIC6.06□□□□□ -1.44
PDGFBP01127 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFBP01127 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFBP01127 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFBP01127 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.06□□□□□ -1.44
PDGFBP01127 AC011815.2-201ENST00000618230 2021 ntBASIC6.06□□□□□ -1.44
PDGFBP01127 SRRM1P3-201ENST00000426911 2678 ntBASIC6.06□□□□□ -1.44
PDGFBP01127 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFBP01127 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
PDGFBP01127 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFBP01127 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFBP01127 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFBP01127 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PDGFBP01127 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFBP01127 RN7SKP103-201ENST00000363848 320 ntBASIC6.06□□□□□ -1.44
PDGFBP01127 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFBP01127 AC009804.1-201ENST00000400949 179 ntBASIC6.06□□□□□ -1.44
PDGFBP01127 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFBP01127 RPS15AP30-201ENST00000420976 390 ntBASIC6.06□□□□□ -1.44
PDGFBP01127 SETP9-201ENST00000423837 832 ntBASIC6.06□□□□□ -1.44
PDGFBP01127 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFBP01127 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.06□□□□□ -1.44
PDGFBP01127 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFBP01127 AC100832.1-201ENST00000471945 383 ntBASIC6.06□□□□□ -1.44
PDGFBP01127 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFBP01127 AC072052.1-201ENST00000496556 306 ntBASIC6.06□□□□□ -1.44
PDGFBP01127 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFBP01127 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFBP01127 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.06□□□□□ -1.44
PDGFBP01127 HMGB1P42-201ENST00000532126 553 ntBASIC6.06□□□□□ -1.44
PDGFBP01127 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.06□□□□□ -1.44
PDGFBP01127 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFBP01127 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFBP01127 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFBP01127 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.06□□□□□ -1.44
PDGFBP01127 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFBP01127 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.06□□□□□ -1.44
PDGFBP01127 SUGT1P3-202ENST00000604259 383 ntBASIC6.06□□□□□ -1.44
PDGFBP01127 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.06□□□□□ -1.44
PDGFBP01127 AC133644.2-201ENST00000608142 540 ntBASIC6.06□□□□□ -1.44
PDGFBP01127 AL137067.2-201ENST00000621202 131 ntBASIC6.06□□□□□ -1.44
PDGFBP01127 MIR8080-201ENST00000622224 89 ntBASIC6.06□□□□□ -1.44
PDGFBP01127 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PDGFBP01127 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PDGFBP01127 AC140479.2-201ENST00000421567 3130 ntBASIC6.06□□□□□ -1.44
PDGFBP01127 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.06□□□□□ -1.44
PDGFBP01127 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.06□□□□□ -1.44
PDGFBP01127 AL031651.1-201ENST00000615357 1438 ntBASIC6.06□□□□□ -1.44
PDGFBP01127 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.06□□□□□ -1.44
PDGFBP01127 MAPK10-323ENST00000641493 3207 ntBASIC6.06□□□□□ -1.44
PDGFBP01127 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PDGFBP01127 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PDGFBP01127 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFBP01127 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PDGFBP01127 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFBP01127 CASC19-255ENST00000641733 1385 ntBASIC6.06□□□□□ -1.44
PDGFBP01127 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFBP01127 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PDGFBP01127 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFBP01127 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFBP01127 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFBP01127 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.05□□□□□ -1.44
PDGFBP01127 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.05□□□□□ -1.44
PDGFBP01127 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.05□□□□□ -1.44
PDGFBP01127 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PDGFBP01127 RNU105B-201ENST00000364478 208 ntBASIC6.05□□□□□ -1.44
PDGFBP01127 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PDGFBP01127 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFBP01127 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.05□□□□□ -1.44
PDGFBP01127 AL139128.1-201ENST00000413921 941 ntBASIC6.05□□□□□ -1.44
PDGFBP01127 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.05□□□□□ -1.44
PDGFBP01127 GSTA7P-201ENST00000438425 448 ntBASIC6.05□□□□□ -1.44
PDGFBP01127 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFBP01127 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.05□□□□□ -1.44
PDGFBP01127 RPS23P9-201ENST00000448848 438 ntBASIC6.05□□□□□ -1.44
PDGFBP01127 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFBP01127 OR7E157P-201ENST00000494376 911 ntBASIC6.05□□□□□ -1.44
PDGFBP01127 AC008629.2-201ENST00000503783 483 ntBASIC6.05□□□□□ -1.44
PDGFBP01127 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFBP01127 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFBP01127 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFBP01127 GSTP1P1-201ENST00000548078 319 ntBASIC6.05□□□□□ -1.44
PDGFBP01127 OR1F2P-201ENST00000570470 933 ntBASIC6.05□□□□□ -1.44
PDGFBP01127 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.05□□□□□ -1.44
PDGFBP01127 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.05□□□□□ -1.44
PDGFBP01127 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.05□□□□□ -1.44
PDGFBP01127 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.05□□□□□ -1.44
PDGFBP01127 AL049539.1-201ENST00000611964 459 ntBASIC6.05□□□□□ -1.44
PDGFBP01127 MIR6837-201ENST00000620884 64 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms