Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SMAD6O43541 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SMAD6O43541 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SMAD6O43541 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SMAD6O43541 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SMAD6O43541 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SMAD6O43541 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SMAD6O43541 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.44
SMAD6O43541 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.08□□□□□ -1.44
SMAD6O43541 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
SMAD6O43541 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.08□□□□□ -1.44
SMAD6O43541 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.08□□□□□ -1.44
SMAD6O43541 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SMAD6O43541 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.08□□□□□ -1.44
SMAD6O43541 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.08□□□□□ -1.44
SMAD6O43541 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SMAD6O43541 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SMAD6O43541 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.08□□□□□ -1.44
SMAD6O43541 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SMAD6O43541 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SMAD6O43541 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SMAD6O43541 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SMAD6O43541 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SMAD6O43541 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.08□□□□□ -1.44
SMAD6O43541 RPS17P17-201ENST00000419392 409 ntBASIC6.08□□□□□ -1.44
SMAD6O43541 RPS3P2-201ENST00000421346 701 ntBASIC6.08□□□□□ -1.44
SMAD6O43541 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.08□□□□□ -1.44
SMAD6O43541 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.08□□□□□ -1.44
SMAD6O43541 BMS1P10-201ENST00000443754 1120 ntBASIC6.08□□□□□ -1.44
SMAD6O43541 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SMAD6O43541 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SMAD6O43541 SDC4P-201ENST00000453285 601 ntBASIC6.08□□□□□ -1.44
SMAD6O43541 AC084754.1-201ENST00000463466 464 ntBASIC6.08□□□□□ -1.44
SMAD6O43541 AC008629.2-201ENST00000503783 483 ntBASIC6.08□□□□□ -1.44
SMAD6O43541 AC008945.1-201ENST00000505144 499 ntBASIC6.08□□□□□ -1.44
SMAD6O43541 COL6A4P2-205ENST00000509855 506 ntBASIC6.08□□□□□ -1.44
SMAD6O43541 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.08□□□□□ -1.44
SMAD6O43541 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.08□□□□□ -1.44
SMAD6O43541 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.08□□□□□ -1.44
SMAD6O43541 OR4A46P-201ENST00000527255 933 ntBASIC6.08□□□□□ -1.44
SMAD6O43541 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.08□□□□□ -1.44
SMAD6O43541 AC007494.1-201ENST00000562293 760 ntBASIC6.08□□□□□ -1.44
SMAD6O43541 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.08□□□□□ -1.44
SMAD6O43541 AC020978.7-201ENST00000575953 1187 ntBASIC6.08□□□□□ -1.44
SMAD6O43541 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.08□□□□□ -1.44
SMAD6O43541 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.08□□□□□ -1.44
SMAD6O43541 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.08□□□□□ -1.44
SMAD6O43541 AC016542.1-201ENST00000608259 493 ntBASIC6.08□□□□□ -1.44
SMAD6O43541 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.08□□□□□ -1.44
SMAD6O43541 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.08□□□□□ -1.44
SMAD6O43541 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC6.08□□□□□ -1.44
SMAD6O43541 AC005225.5-201ENST00000623547 2225 ntBASIC6.08□□□□□ -1.44
SMAD6O43541 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.08□□□□□ -1.44
SMAD6O43541 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.08□□□□□ -1.44
SMAD6O43541 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SMAD6O43541 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SMAD6O43541 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.08□□□□□ -1.44
SMAD6O43541 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SMAD6O43541 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.08□□□□□ -1.44
SMAD6O43541 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SMAD6O43541 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SMAD6O43541 AC018628.1-201ENST00000624147 3819 ntBASIC6.08□□□□□ -1.44
SMAD6O43541 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SMAD6O43541 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SMAD6O43541 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.08□□□□□ -1.44
SMAD6O43541 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
SMAD6O43541 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
SMAD6O43541 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SMAD6O43541 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.07□□□□□ -1.44
SMAD6O43541 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SMAD6O43541 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.07□□□□□ -1.44
SMAD6O43541 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
SMAD6O43541 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SMAD6O43541 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SMAD6O43541 SELENOWP1-201ENST00000322792 252 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 RNU1-150P-201ENST00000362491 162 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.07□□□□□ -1.44
SMAD6O43541 AL096800.1-201ENST00000405326 893 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 MIR1203-201ENST00000408812 85 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC6.07□□□□□ -1.44
SMAD6O43541 RPL23AP18-201ENST00000416139 468 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.07□□□□□ -1.44
SMAD6O43541 KIF4CP-201ENST00000422742 1279 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 RPS29P14-201ENST00000431518 171 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 AL389925.1-201ENST00000432257 728 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 HSFY7P-201ENST00000432672 318 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.07□□□□□ -1.44
SMAD6O43541 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.07□□□□□ -1.44
SMAD6O43541 HSFY8P-201ENST00000437934 318 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.07□□□□□ -1.44
SMAD6O43541 HSFY5P-201ENST00000453726 309 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.07□□□□□ -1.44
SMAD6O43541 ACA64.1-201ENST00000459171 127 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 AC023245.1-201ENST00000468501 517 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SMAD6O43541 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.07□□□□□ -1.44
SMAD6O43541 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.07□□□□□ -1.44
SMAD6O43541 CCDC11P1-201ENST00000503137 1162 ntBASIC6.07□□□□□ -1.44
SMAD6O43541 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.07□□□□□ -1.44
SMAD6O43541 AC138409.2-202ENST00000507274 458 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms