Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM1O00151 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM1O00151 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
PDLIM1O00151 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM1O00151 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM1O00151 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM1O00151 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM1O00151 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM1O00151 RN7SKP185-201ENST00000362813 326 ntBASIC5.72□□□□□ -1.49
PDLIM1O00151 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PDLIM1O00151 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM1O00151 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PDLIM1O00151 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM1O00151 LINC00328-2P-201ENST00000436585 219 ntBASIC5.72□□□□□ -1.49
PDLIM1O00151 AC245291.3-201ENST00000443400 292 ntBASIC5.72□□□□□ -1.49
PDLIM1O00151 AL162739.1-201ENST00000450606 307 ntBASIC5.72□□□□□ -1.49
PDLIM1O00151 YRDCP3-201ENST00000456507 480 ntBASIC5.72□□□□□ -1.49
PDLIM1O00151 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM1O00151 AC098818.1-201ENST00000478593 252 ntBASIC5.72□□□□□ -1.49
PDLIM1O00151 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.72□□□□□ -1.49
PDLIM1O00151 AC010343.2-201ENST00000510162 224 ntBASIC5.72□□□□□ -1.49
PDLIM1O00151 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.72□□□□□ -1.49
PDLIM1O00151 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.72□□□□□ -1.49
PDLIM1O00151 TPM3P3-201ENST00000521343 354 ntBASIC5.72□□□□□ -1.49
PDLIM1O00151 AC092865.1-201ENST00000544395 1023 ntBASIC5.72□□□□□ -1.49
PDLIM1O00151 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM1O00151 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
PDLIM1O00151 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.72□□□□□ -1.49
PDLIM1O00151 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.72□□□□□ -1.49
PDLIM1O00151 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.72□□□□□ -1.49
PDLIM1O00151 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.72□□□□□ -1.49
PDLIM1O00151 AC138207.8-204ENST00000579588 527 ntBASIC5.72□□□□□ -1.49
PDLIM1O00151 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.72□□□□□ -1.49
PDLIM1O00151 NDUFB9P1-201ENST00000604683 510 ntBASIC5.72□□□□□ -1.49
PDLIM1O00151 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM1O00151 AL161912.3-201ENST00000605404 628 ntBASIC5.72□□□□□ -1.49
PDLIM1O00151 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.72□□□□□ -1.49
PDLIM1O00151 TMEM30CP-203ENST00000637814 1035 ntBASIC5.72□□□□□ -1.49
PDLIM1O00151 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM1O00151 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PDLIM1O00151 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
PDLIM1O00151 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.72□□□□□ -1.49
PDLIM1O00151 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM1O00151 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
PDLIM1O00151 AC005224.3-201ENST00000584683 2140 ntBASIC5.72□□□□□ -1.49
PDLIM1O00151 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM1O00151 AL137058.3-201ENST00000624531 3099 ntBASIC5.72□□□□□ -1.49
PDLIM1O00151 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.72□□□□□ -1.49
PDLIM1O00151 AC021242.1-201ENST00000507315 2035 ntBASIC5.72□□□□□ -1.49
PDLIM1O00151 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDLIM1O00151 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM1O00151 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.72□□□□□ -1.49
PDLIM1O00151 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.49
PDLIM1O00151 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.71□□□□□ -1.49
PDLIM1O00151 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PDLIM1O00151 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.71□□□□□ -1.49
PDLIM1O00151 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM1O00151 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.71□□□□□ -1.5
PDLIM1O00151 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM1O00151 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM1O00151 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.71□□□□□ -1.5
PDLIM1O00151 RNU6-249P-201ENST00000363016 102 ntBASIC5.71□□□□□ -1.5
PDLIM1O00151 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PDLIM1O00151 GPS2P1-201ENST00000411761 986 ntBASIC5.71□□□□□ -1.5
PDLIM1O00151 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.71□□□□□ -1.5
PDLIM1O00151 RPL7AP51-201ENST00000422016 760 ntBASIC5.71□□□□□ -1.5
PDLIM1O00151 AL139184.1-202ENST00000422303 222 ntBASIC5.71□□□□□ -1.5
PDLIM1O00151 AC113412.1-201ENST00000425840 504 ntBASIC5.71□□□□□ -1.5
PDLIM1O00151 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.71□□□□□ -1.5
PDLIM1O00151 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.71□□□□□ -1.5
PDLIM1O00151 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.71□□□□□ -1.5
PDLIM1O00151 RAB28P2-201ENST00000454299 641 ntBASIC5.71□□□□□ -1.5
PDLIM1O00151 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.71□□□□□ -1.5
PDLIM1O00151 AP000942.1-201ENST00000463969 747 ntBASIC5.71□□□□□ -1.5
PDLIM1O00151 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.71□□□□□ -1.5
PDLIM1O00151 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM1O00151 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.71□□□□□ -1.5
PDLIM1O00151 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM1O00151 AC090958.1-201ENST00000511122 351 ntBASIC5.71□□□□□ -1.5
PDLIM1O00151 GAPDHP71-201ENST00000511530 1003 ntBASIC5.71□□□□□ -1.5
PDLIM1O00151 RFPL4AP5-201ENST00000514977 504 ntBASIC5.71□□□□□ -1.5
PDLIM1O00151 snoU109.5-201ENST00000516231 132 ntBASIC5.71□□□□□ -1.5
PDLIM1O00151 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.71□□□□□ -1.5
PDLIM1O00151 AC116917.1-201ENST00000520558 305 ntBASIC5.71□□□□□ -1.5
PDLIM1O00151 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.71□□□□□ -1.5
PDLIM1O00151 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.71□□□□□ -1.5
PDLIM1O00151 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.71□□□□□ -1.5
PDLIM1O00151 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PDLIM1O00151 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.71□□□□□ -1.5
PDLIM1O00151 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.71□□□□□ -1.5
PDLIM1O00151 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.71□□□□□ -1.5
PDLIM1O00151 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM1O00151 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.71□□□□□ -1.5
PDLIM1O00151 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.71□□□□□ -1.5
PDLIM1O00151 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.71□□□□□ -1.5
PDLIM1O00151 AC026898.1-201ENST00000586404 571 ntBASIC5.71□□□□□ -1.5
PDLIM1O00151 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.71□□□□□ -1.5
PDLIM1O00151 LINC02495-203ENST00000636704 242 ntBASIC5.71□□□□□ -1.5
PDLIM1O00151 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.71□□□□□ -1.5
PDLIM1O00151 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms