Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 TTLL9-211ENST00000620043 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC127502.2-201ENST00000602663 2351 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC145138.1-201ENST00000512908 2851 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 MAPK10-347ENST00000641762 2856 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC006058.1-201ENST00000568686 5067 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 ZNF300P1-201ENST00000356555 1822 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AC087203.2-201ENST00000526502 1587 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AC012078.1-201ENST00000405035 1646 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 RNA5SP483-201ENST00000363431 118 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 Y_RNA.160-201ENST00000363677 92 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 IL6-203ENST00000401651 539 ntTSL 2 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AL080285.1-201ENST00000404225 984 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 RNU6-77P-201ENST00000410554 91 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AC092745.2-202ENST00000411880 369 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 USP9YP13-201ENST00000417797 480 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 BTF3L4P3-201ENST00000418879 476 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 GRPEL2P2-201ENST00000421856 670 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AL513174.1-201ENST00000423182 629 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 CR391992.1-201ENST00000438601 394 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AC093019.1-201ENST00000443135 252 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AL136454.1-201ENST00000443181 466 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 RPL39P6-201ENST00000448289 150 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 YAP1P2-201ENST00000455104 610 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 RPL10P6-201ENST00000457497 318 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 RN7SL647P-201ENST00000485429 300 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 RN7SL869P-201ENST00000497032 300 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 CDH12P2-201ENST00000504393 298 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AC108078.1-201ENST00000508073 725 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 IGJP1-201ENST00000522682 475 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 OSBPL9P2-201ENST00000526582 1228 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AC018523.1-201ENST00000534211 512 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AP003174.3-201ENST00000537926 516 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AC011611.6-201ENST00000547483 255 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 OR4N1P-201ENST00000554847 949 ntBASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC7.68□□□□□ -1.18
PCDHB11Q9Y5F2 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms