Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC106872.4-201ENST00000510050 523 ntBASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 GTF2IP11-201ENST00000526931 420 ntBASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 AC007956.1-201ENST00000555623 542 ntBASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 AL136131.3-201ENST00000607600 188 ntBASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 uc_338.26-201ENST00000612659 160 ntBASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 AL157762.1-201ENST00000619612 415 ntBASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 AC069234.4-201ENST00000621276 412 ntBASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 AL078595.2-201ENST00000605309 1780 ntBASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CTNNA3Q9UI47 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 PSG10P-201ENST00000501199 1500 ntBASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 AC025470.1-201ENST00000510053 2032 ntBASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 TUBB4BP6-201ENST00000437576 479 ntBASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 RPS7P3-201ENST00000443360 580 ntBASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 RN7SL269P-201ENST00000467795 305 ntBASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 AC008629.2-201ENST00000503783 483 ntBASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 RN7SKP238-201ENST00000516483 249 ntBASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 CYCSP38-201ENST00000559840 322 ntBASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 AL136228.1-201ENST00000622221 319 ntBASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 MVP-219ENST00000629059 120 ntTSL 5 BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 KARSP1-201ENST00000451871 1752 ntBASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 AC020656.2-201ENST00000613291 5309 ntBASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 DNM1P47-203ENST00000571780 12667 ntBASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 CDY3P-201ENST00000454543 1618 ntBASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CTNNA3Q9UI47 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 SNORA51.1-201ENST00000363243 140 ntBASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 GNG5P2-201ENST00000372054 207 ntBASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 GAPDHP75-201ENST00000433910 943 ntBASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 AL391987.1-201ENST00000441025 200 ntBASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 BMS1P10-201ENST00000443754 1120 ntBASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 OR7E158P-201ENST00000524483 910 ntBASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 AC244502.2-201ENST00000543361 851 ntBASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 MIR4443-201ENST00000585052 53 ntBASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 AC027243.2-201ENST00000602530 724 ntBASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 AL355974.3-201ENST00000617383 467 ntBASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 AL357153.4-201ENST00000620487 1016 ntBASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 AL512356.3-201ENST00000623005 461 ntBASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 SNX18P12-201ENST00000624821 759 ntBASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 UBA3-213ENST00000631029 123 ntTSL 5 BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CTNNA3Q9UI47 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.1□□□□□ -1.27
CTNNA3Q9UI47 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms