Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC020978.7-201ENST00000575953 1187 ntBASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 AP001496.3-201ENST00000580230 913 ntBASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 HIRAP1-201ENST00000605318 787 ntBASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 FAM72A-208ENST00000607379 1139 ntBASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 AC087565.3-203ENST00000641018 837 ntBASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPC1L1Q9UHC9 AL034546.1-201ENST00000623740 3693 ntBASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 AC006206.1-201ENST00000544842 3387 ntBASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 TMSB4XP4-201ENST00000323496 618 ntBASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 RNA5SP131-201ENST00000365452 119 ntBASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 AC113412.1-201ENST00000425840 504 ntBASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 AL161636.2-201ENST00000445179 927 ntBASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 RPL12P39-201ENST00000455456 496 ntBASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 AC110749.1-201ENST00000462007 357 ntBASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 OR7E157P-201ENST00000494376 911 ntBASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 ST13P12-201ENST00000508958 1094 ntBASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 RNU6-615P-201ENST00000516065 106 ntBASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 HMGB1P42-201ENST00000532126 553 ntBASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 AC135626.1-201ENST00000556983 435 ntBASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 AL352984.2-202ENST00000613699 155 ntBASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 AC069542.2-201ENST00000624816 216 ntBASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
NPC1L1Q9UHC9 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 AL161901.1-201ENST00000624954 3425 ntBASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 MIR323A-201ENST00000362199 86 ntBASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 RNA5SP178-201ENST00000410380 128 ntBASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 RNGTTP1-201ENST00000420965 728 ntBASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 AP000281.1-201ENST00000444036 316 ntBASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 AC051619.2-201ENST00000559063 397 ntBASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 AC060780.2-201ENST00000589047 198 ntBASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 AL513327.3-201ENST00000602618 469 ntBASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 AL133481.2-203ENST00000607558 139 ntBASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 AC126175.1-201ENST00000617041 758 ntBASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 AL035661.1-201ENST00000620459 1144 ntBASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 CU639417.4-201ENST00000623928 207 ntBASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 MIR193BHG-214ENST00000641765 509 ntBASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
NPC1L1Q9UHC9 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
NPC1L1Q9UHC9 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
NPC1L1Q9UHC9 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC7.77□□□□□ -1.16
NPC1L1Q9UHC9 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 GTF2IP4-201ENST00000453092 2054 ntBASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 RNA5SP46-201ENST00000362370 120 ntBASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 RNU1-136P-201ENST00000384181 164 ntBASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 RPL34P3-201ENST00000421454 338 ntBASIC7.77□□□□□ -1.17
NPC1L1Q9UHC9 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms