Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AL049541.2-201ENST00000626377 555 ntBASIC7.63□□□□□ -1.19
CNTN3Q9P232 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.63□□□□□ -1.19
CNTN3Q9P232 CASC19-212ENST00000641153 1287 ntBASIC7.63□□□□□ -1.19
CNTN3Q9P232 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CNTN3Q9P232 AP003119.3-201ENST00000566747 4192 ntBASIC7.63□□□□□ -1.19
CNTN3Q9P232 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CNTN3Q9P232 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.63□□□□□ -1.19
CNTN3Q9P232 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CNTN3Q9P232 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.63□□□□□ -1.19
CNTN3Q9P232 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CNTN3Q9P232 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CNTN3Q9P232 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.63□□□□□ -1.19
CNTN3Q9P232 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CNTN3Q9P232 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CNTN3Q9P232 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CNTN3Q9P232 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CNTN3Q9P232 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CNTN3Q9P232 ZNF833P-201ENST00000424938 1494 ntBASIC7.62□□□□□ -1.19
CNTN3Q9P232 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 CTAGE11P-201ENST00000451540 2353 ntBASIC7.62□□□□□ -1.19
CNTN3Q9P232 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CNTN3Q9P232 SAMM50P1-201ENST00000455403 1399 ntBASIC7.62□□□□□ -1.19
CNTN3Q9P232 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
CNTN3Q9P232 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
CNTN3Q9P232 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CNTN3Q9P232 AC005261.2-201ENST00000593427 4258 ntBASIC7.62□□□□□ -1.19
CNTN3Q9P232 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
CNTN3Q9P232 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CNTN3Q9P232 SNORD65C-201ENST00000390962 71 ntBASIC7.62□□□□□ -1.19
CNTN3Q9P232 TRBV24OR9-2-201ENST00000416632 435 ntBASIC7.62□□□□□ -1.19
CNTN3Q9P232 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 MTCO2P34-201ENST00000421994 607 ntBASIC7.62□□□□□ -1.19
CNTN3Q9P232 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 AC009518.3-201ENST00000438972 253 ntBASIC7.62□□□□□ -1.19
CNTN3Q9P232 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 AC107015.1-201ENST00000466902 747 ntBASIC7.62□□□□□ -1.19
CNTN3Q9P232 RPS6P4-201ENST00000494693 758 ntBASIC7.62□□□□□ -1.19
CNTN3Q9P232 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 SCARNA11.1-201ENST00000516918 132 ntBASIC7.62□□□□□ -1.19
CNTN3Q9P232 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 NAP1L1P1-201ENST00000524793 1063 ntBASIC7.62□□□□□ -1.19
CNTN3Q9P232 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 AC244502.2-201ENST00000543361 851 ntBASIC7.62□□□□□ -1.19
CNTN3Q9P232 AC069240.2-201ENST00000550242 609 ntBASIC7.62□□□□□ -1.19
CNTN3Q9P232 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 AC136619.2-201ENST00000563361 631 ntBASIC7.62□□□□□ -1.19
CNTN3Q9P232 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CNTN3Q9P232 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 AP000403.1-201ENST00000603349 851 ntBASIC7.62□□□□□ -1.19
CNTN3Q9P232 AL109618.2-201ENST00000605527 211 ntBASIC7.62□□□□□ -1.19
CNTN3Q9P232 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 ZNF663P-202ENST00000641770 1131 ntBASIC7.62□□□□□ -1.19
CNTN3Q9P232 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CNTN3Q9P232 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.62□□□□□ -1.19
CNTN3Q9P232 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CNTN3Q9P232 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CNTN3Q9P232 AC073544.1-201ENST00000600110 1595 ntBASIC7.62□□□□□ -1.19
CNTN3Q9P232 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CNTN3Q9P232 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CNTN3Q9P232 AC073429.2-201ENST00000569694 1444 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 AL078595.2-201ENST00000605309 1780 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 ABCA11P-202ENST00000504019 2110 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 HSPD1P1-201ENST00000503199 1726 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 AC087359.1-201ENST00000508335 1740 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.61□□□□□ -1.19
CNTN3Q9P232 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 AC007342.7-201ENST00000624610 2337 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 SSXP3-201ENST00000442971 1300 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNTN3Q9P232 CDY7P-201ENST00000429883 1604 ntBASIC7.61□□□□□ -1.19
CNTN3Q9P232 AC079178.2-201ENST00000439323 1624 ntBASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms