Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
KIAA1549Q9HCM3 RPS7P3-201ENST00000443360 580 ntBASIC5.22□□□□□ -1.57
KIAA1549Q9HCM3 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.22□□□□□ -1.57
KIAA1549Q9HCM3 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.22□□□□□ -1.57
KIAA1549Q9HCM3 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
KIAA1549Q9HCM3 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.22□□□□□ -1.57
KIAA1549Q9HCM3 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.22□□□□□ -1.57
KIAA1549Q9HCM3 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.22□□□□□ -1.57
KIAA1549Q9HCM3 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.22□□□□□ -1.57
KIAA1549Q9HCM3 AC090022.1-201ENST00000546569 311 ntBASIC5.22□□□□□ -1.57
KIAA1549Q9HCM3 AC096996.1-201ENST00000563813 325 ntBASIC5.22□□□□□ -1.57
KIAA1549Q9HCM3 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.22□□□□□ -1.57
KIAA1549Q9HCM3 AC127024.6-201ENST00000621598 424 ntBASIC5.22□□□□□ -1.57
KIAA1549Q9HCM3 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.22□□□□□ -1.57
KIAA1549Q9HCM3 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
KIAA1549Q9HCM3 THAP12P9-201ENST00000503971 2360 ntBASIC5.22□□□□□ -1.57
KIAA1549Q9HCM3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KIAA1549Q9HCM3 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
KIAA1549Q9HCM3 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC5.22□□□□□ -1.57
KIAA1549Q9HCM3 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KIAA1549Q9HCM3 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
KIAA1549Q9HCM3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.21□□□□□ -1.57
KIAA1549Q9HCM3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
KIAA1549Q9HCM3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
KIAA1549Q9HCM3 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
KIAA1549Q9HCM3 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
KIAA1549Q9HCM3 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 AC007114.2-201ENST00000576014 4281 ntBASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 OR9K1P-201ENST00000326513 941 ntBASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 AL121886.1-201ENST00000358609 435 ntBASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 RPL23AP18-201ENST00000416139 468 ntBASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 AL355433.1-201ENST00000422804 300 ntBASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 AL662874.1-201ENST00000426065 230 ntBASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 AC023141.8-201ENST00000442554 208 ntBASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 RN7SL515P-201ENST00000463999 297 ntBASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 RN7SL629P-201ENST00000489622 285 ntBASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 AL049767.1-202ENST00000637826 242 ntBASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KIAA1549Q9HCM3 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 SELENOWP1-201ENST00000322792 252 ntBASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 U3.28-201ENST00000391249 210 ntBASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 RN7SKP293-201ENST00000411389 296 ntBASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 RNU6-615P-201ENST00000516065 106 ntBASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 IGKV2-19-201ENST00000518132 283 ntBASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 OR4A42P-201ENST00000531397 938 ntBASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 AC009831.5-201ENST00000624000 3189 ntBASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 AL049634.1-201ENST00000453770 1720 ntBASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KIAA1549Q9HCM3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms