Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 MTHFD2P5-201ENST00000320415 844 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 RNFT1P3-201ENST00000340898 1052 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 RNU4-4P-201ENST00000364588 130 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 RNU12-2P-201ENST00000364789 156 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 TRAV35-201ENST00000390462 330 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 PDCL3P5-201ENST00000398028 722 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AL136310.1-201ENST00000404926 654 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 ATF1P1-201ENST00000406040 927 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 RPS21P8-201ENST00000413365 247 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 TEX41-202ENST00000414256 604 ntTSL 5 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AL158825.1-201ENST00000414735 521 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AC009362.1-201ENST00000427253 406 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 IFNNP1-201ENST00000429219 553 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AC091390.2-201ENST00000432573 374 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 OSTCP2-201ENST00000437956 444 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 RPS7P4-201ENST00000444127 582 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AL360221.1-201ENST00000445989 335 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 NDUFAF4P4-201ENST00000454883 502 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 GYG1P1-201ENST00000460864 698 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 STRADBP1-201ENST00000478954 1281 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AC122714.1-201ENST00000502510 459 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AC008868.1-201ENST00000509786 737 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 MTND3P5-201ENST00000512798 333 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 MTATP6P1-201ENST00000514057 681 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 OR9L1P-201ENST00000529493 933 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 SSU72P6-201ENST00000532644 488 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AC007537.1-201ENST00000539347 327 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 NXPE2P1-201ENST00000543705 726 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AL109628.1-201ENST00000556877 366 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AL354943.1-201ENST00000572103 781 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 MIR5682-201ENST00000584864 76 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 MIR4428-201ENST00000584884 73 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AC015802.2-201ENST00000589690 189 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 RBM11P1-201ENST00000604951 799 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AL021997.1-201ENST00000605757 193 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AC024060.1-201ENST00000607052 494 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AL008582.1-201ENST00000609612 442 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AC006453.3-201ENST00000635891 377 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AL392088.2-201ENST00000637607 285 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AL353743.3-201ENST00000442109 1468 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AC095050.2-201ENST00000510748 1458 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
SEC61A2Q9H9S3 ZNF658B-201ENST00000602828 3408 ntBASIC6.12□□□□□ -1.43
SEC61A2Q9H9S3 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SEC61A2Q9H9S3 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SEC61A2Q9H9S3 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.12□□□□□ -1.43
SEC61A2Q9H9S3 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms