Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 FANCD2P2-201ENST00000437591 1400 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AL360271.1-201ENST00000395679 510 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 TAF9BP2-201ENST00000400856 499 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 RN7SKP281-201ENST00000410472 352 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 U3.43-201ENST00000410734 213 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 RNU4-27P-201ENST00000410889 139 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 TATDN1P1-201ENST00000414123 891 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 UBE2V1P14-201ENST00000415815 558 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 BTF3P9-201ENST00000418784 283 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AL138787.1-202ENST00000437804 898 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 HMGN1P32-201ENST00000441744 256 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AC009237.1-201ENST00000442127 744 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 GAPDHP37-201ENST00000442317 968 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 PPM1AP1-201ENST00000502740 1135 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 TRAV31-201ENST00000502780 342 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AC010343.2-201ENST00000510162 224 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AC121161.1-201ENST00000510606 652 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 RNA5SP96-201ENST00000516041 107 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AC025918.2-201ENST00000558683 763 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AC009120.3-201ENST00000563335 499 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 MIR4732-201ENST00000581873 76 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 SNORA74.4-201ENST00000607595 199 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AP005229.2-201ENST00000609980 697 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AC024255.1-201ENST00000614376 102 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AP000770.2-201ENST00000623694 100 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AC003985.2-201ENST00000562268 1669 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 RNFT1P3-201ENST00000340898 1052 ntBASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 RNU1-84P-201ENST00000365447 164 ntBASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 OR13C3-201ENST00000374781 1108 ntBASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AL033519.1-201ENST00000407266 307 ntBASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AL158827.1-201ENST00000416300 391 ntBASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AC013262.1-201ENST00000426710 252 ntBASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 LDHAP2-201ENST00000437325 985 ntBASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 RPL7P55-201ENST00000450522 746 ntBASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 VPS25P1-201ENST00000455691 508 ntBASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AC022730.1-201ENST00000473114 568 ntBASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 SETP6-201ENST00000479329 568 ntBASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AC114324.2-202ENST00000503812 134 ntBASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC6.25□□□□□ -1.41
TRIM54Q9BYV2 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms