Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AC005034.3-201ENST00000604845 1747 ntBASIC4.46□□□□□ -1.7
KRTAP3-1Q9BYR8 CAGE1-202ENST00000338150 2771 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
KRTAP3-1Q9BYR8 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
KRTAP3-1Q9BYR8 ZNF432-201ENST00000221315 2577 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KRTAP3-1Q9BYR8 WDR95P-201ENST00000425638 1542 ntBASIC4.46□□□□□ -1.7
KRTAP3-1Q9BYR8 VPS35P1-201ENST00000563400 1518 ntBASIC4.46□□□□□ -1.7
KRTAP3-1Q9BYR8 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KRTAP3-1Q9BYR8 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC4.46□□□□□ -1.7
KRTAP3-1Q9BYR8 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
KRTAP3-1Q9BYR8 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC4.46□□□□□ -1.7
KRTAP3-1Q9BYR8 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KRTAP3-1Q9BYR8 TSSK4-202ENST00000339917 1321 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.7
KRTAP3-1Q9BYR8 SSXP3-201ENST00000442971 1300 ntBASIC4.46□□□□□ -1.7
KRTAP3-1Q9BYR8 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC4.46□□□□□ -1.7
KRTAP3-1Q9BYR8 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KRTAP3-1Q9BYR8 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AC110998.1-201ENST00000519029 2053 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AL353795.3-201ENST00000624351 5702 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 C3P1-202ENST00000497718 4954 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 EEF1A1P8-201ENST00000419025 1388 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 SLMAP-220ENST00000495364 1383 ntTSL 2 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 GLULP5-201ENST00000547831 1390 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 XPOTP1-201ENST00000443317 2398 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 DNAJC6-202ENST00000371069 5365 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 SCGB1D1-201ENST00000306238 453 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 ZNF254-201ENST00000339642 511 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 RPS21-201ENST00000343986 344 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 MAP1LC3C-201ENST00000357246 1182 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 RNA5SP349-201ENST00000363743 109 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 RNU6-99P-201ENST00000364721 107 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 SPRR2D-204ENST00000368758 782 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 MORN5-201ENST00000373764 705 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 HLA-DRA-201ENST00000374982 1169 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 RNU6-952P-201ENST00000391164 108 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 LINC02449-202ENST00000399866 517 ntTSL 3 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AC078974.1-201ENST00000411597 223 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AC079834.1-201ENST00000414016 421 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 MRPS18BP1-201ENST00000414228 192 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AL356968.1-201ENST00000416622 474 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 ZNF70P1-201ENST00000417480 624 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 RPS15AP12-201ENST00000419498 388 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AC092100.1-203ENST00000421513 653 ntTSL 3 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AC006548.1-201ENST00000427470 102 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AC137499.1-201ENST00000427602 88 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AC093151.1-201ENST00000427711 313 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 SNAI1P1-201ENST00000428587 777 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AC083822.1-201ENST00000438001 201 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AL353072.1-201ENST00000446021 442 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AC013399.1-201ENST00000450311 418 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 RFKP2-201ENST00000464555 477 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AC128713.1-201ENST00000471495 306 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 RPL3P10-201ENST00000476002 1164 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AL096701.3-202ENST00000483736 615 ntTSL 2 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 IGKV1D-16-201ENST00000492446 378 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 SUMO2P4-201ENST00000504193 276 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 C4orf22-205ENST00000508675 753 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 RN7SKP24-201ENST00000515888 284 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 SCARNA24.1-201ENST00000516465 137 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 RNU6-273P-201ENST00000516937 96 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AC105031.1-201ENST00000518550 476 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AC022784.6-205ENST00000518619 807 ntTSL 3 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AC008663.3-201ENST00000520300 457 ntTSL 3 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 SUMO2P20-201ENST00000520803 283 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AP001804.3-201ENST00000525146 880 ntBASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 GLYATL1P3-201ENST00000527482 909 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 LINC00958-203ENST00000527945 1121 ntTSL 2 BASIC4.45□□□□□ -1.7
KRTAP3-1Q9BYR8 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms