Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AC011933.2-201ENST00000578539 2790 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 EIF2B3-203ENST00000372183 1457 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 Z93929.1-201ENST00000418200 1475 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 WASF5P-205ENST00000428639 1455 ntBASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LCE3DQ9BYE3 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 MIR4458HG-203ENST00000606459 3239 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 SLC9B1P1-201ENST00000331172 1337 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 SLC9B1P3-201ENST00000452667 1334 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 PSG11-202ENST00000320078 1575 ntAPPRIS P2 TSL 2 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 CASC19-204ENST00000641001 2055 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC138627.1-203ENST00000641872 1680 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AL512662.1-201ENST00000624850 2251 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC090643.1-201ENST00000623600 3100 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 VPS35P1-201ENST00000563400 1518 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 CEACAM20-202ENST00000614577 1530 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 TAS2R60-201ENST00000332690 957 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 RPS21-201ENST00000343986 344 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 Y_RNA.1-201ENST00000352915 104 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 RNU6-1085P-201ENST00000363576 107 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 RN7SKP239-201ENST00000364814 295 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 LINC00970-201ENST00000366408 1129 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 SPRR2D-204ENST00000368758 782 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 Y_RNA.460-201ENST00000384255 102 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 FCAR-206ENST00000391724 762 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 HNRNPCP2-201ENST00000399515 881 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 VN1R8P-201ENST00000407739 893 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AL603766.1-201ENST00000407763 664 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 RN7SKP154-201ENST00000410136 290 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 TGFB2-AS1-201ENST00000414452 557 ntTSL 3 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC092580.2-201ENST00000414654 469 ntTSL 2 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AL031727.2-201ENST00000416470 207 ntTSL 2 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 SDCBPP3-201ENST00000419629 891 ntBASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 ARHGEF7-IT1-201ENST00000423329 804 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LCE3DQ9BYE3 FABP7P1-201ENST00000424004 391 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms