Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SHANK3Q9BYB0 AC126755.2-208ENST00000327792 462 ntBASIC7.35□□□□□ -1.23
SHANK3Q9BYB0 AC138969.1-213ENST00000331436 462 ntBASIC7.35□□□□□ -1.23
SHANK3Q9BYB0 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
SHANK3Q9BYB0 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SHANK3Q9BYB0 RPS16P5-201ENST00000406501 404 ntBASIC7.35□□□□□ -1.23
SHANK3Q9BYB0 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.35□□□□□ -1.23
SHANK3Q9BYB0 AL389915.2-201ENST00000454576 441 ntBASIC7.35□□□□□ -1.23
SHANK3Q9BYB0 RN7SL352P-201ENST00000466002 277 ntBASIC7.35□□□□□ -1.23
SHANK3Q9BYB0 RAB9BP1-201ENST00000519581 626 ntBASIC7.35□□□□□ -1.23
SHANK3Q9BYB0 AC022832.1-201ENST00000530718 645 ntBASIC7.35□□□□□ -1.23
SHANK3Q9BYB0 DERA-209ENST00000532964 854 ntTSL 5 BASIC7.35□□□□□ -1.23
SHANK3Q9BYB0 BLZF2P-201ENST00000553776 1130 ntBASIC7.35□□□□□ -1.23
SHANK3Q9BYB0 AL049779.2-201ENST00000553847 315 ntBASIC7.35□□□□□ -1.23
SHANK3Q9BYB0 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC7.35□□□□□ -1.23
SHANK3Q9BYB0 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC7.35□□□□□ -1.23
SHANK3Q9BYB0 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC7.35□□□□□ -1.23
SHANK3Q9BYB0 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC7.35□□□□□ -1.23
SHANK3Q9BYB0 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
SHANK3Q9BYB0 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SHANK3Q9BYB0 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
SHANK3Q9BYB0 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 AC006206.1-201ENST00000544842 3387 ntBASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 AL031651.1-201ENST00000615357 1438 ntBASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 AL035419.1-201ENST00000397037 564 ntBASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 AC007562.1-201ENST00000421819 517 ntBASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 RBMY2QP-201ENST00000429799 1147 ntBASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 AC023274.2-201ENST00000445264 521 ntBASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 RNU6-941P-201ENST00000516346 108 ntBASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 BMPR1APS2-201ENST00000527904 1012 ntBASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 AC018558.5-201ENST00000565840 952 ntBASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 MIR1254-2-201ENST00000579553 63 ntBASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 AC011840.5-201ENST00000582125 771 ntBASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 AC008745.1-201ENST00000604064 271 ntBASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC7.34□□□□□ -1.23
SHANK3Q9BYB0 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 OR4K12P-201ENST00000406538 961 ntBASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 AC245028.1-201ENST00000423259 256 ntBASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 AC012519.1-201ENST00000424588 610 ntBASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 AL360081.1-201ENST00000428299 555 ntBASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 AC127381.1-201ENST00000555979 939 ntBASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 AC069307.1-201ENST00000602820 447 ntBASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
SHANK3Q9BYB0 RNA5SP319-201ENST00000362768 119 ntBASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 RNA5SP87-201ENST00000384155 118 ntBASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 AC078878.1-201ENST00000539832 958 ntBASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 AC073869.10-201ENST00000642016 354 ntBASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC7.32□□□□□ -1.24
SHANK3Q9BYB0 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms