Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
ABCA3Q99758 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
ABCA3Q99758 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
ABCA3Q99758 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
ABCA3Q99758 AC005224.3-201ENST00000584683 2140 ntBASIC7.48□□□□□ -1.21
ABCA3Q99758 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
ABCA3Q99758 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC7.48□□□□□ -1.21
ABCA3Q99758 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
ABCA3Q99758 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
ABCA3Q99758 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.48□□□□□ -1.21
ABCA3Q99758 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC7.48□□□□□ -1.21
ABCA3Q99758 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
ABCA3Q99758 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
ABCA3Q99758 MFSD8-239ENST00000641590 2479 ntBASIC7.47□□□□□ -1.21
ABCA3Q99758 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
ABCA3Q99758 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
ABCA3Q99758 AL662795.2-201ENST00000624252 3706 ntBASIC7.47□□□□□ -1.21
ABCA3Q99758 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.47□□□□□ -1.21
ABCA3Q99758 ADIG-201ENST00000373348 430 ntTSL 2 BASIC7.47□□□□□ -1.21
ABCA3Q99758 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC7.47□□□□□ -1.21
ABCA3Q99758 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC7.47□□□□□ -1.21
ABCA3Q99758 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.47□□□□□ -1.21
ABCA3Q99758 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC7.47□□□□□ -1.21
ABCA3Q99758 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.47□□□□□ -1.21
ABCA3Q99758 RPL7L1P3-201ENST00000455249 689 ntBASIC7.47□□□□□ -1.21
ABCA3Q99758 RNU1-88P-201ENST00000459274 128 ntBASIC7.47□□□□□ -1.21
ABCA3Q99758 RN7SL352P-201ENST00000466002 277 ntBASIC7.47□□□□□ -1.21
ABCA3Q99758 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC7.47□□□□□ -1.21
ABCA3Q99758 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
ABCA3Q99758 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC7.47□□□□□ -1.21
ABCA3Q99758 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
ABCA3Q99758 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.47□□□□□ -1.21
ABCA3Q99758 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
ABCA3Q99758 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
ABCA3Q99758 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
ABCA3Q99758 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC7.47□□□□□ -1.21
ABCA3Q99758 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
ABCA3Q99758 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC7.47□□□□□ -1.21
ABCA3Q99758 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
ABCA3Q99758 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
ABCA3Q99758 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
ABCA3Q99758 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
ABCA3Q99758 AP004289.1-201ENST00000436307 2205 ntBASIC7.47□□□□□ -1.21
ABCA3Q99758 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
ABCA3Q99758 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
ABCA3Q99758 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.47□□□□□ -1.21
ABCA3Q99758 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
ABCA3Q99758 RN7SKP95-201ENST00000362860 303 ntBASIC7.47□□□□□ -1.21
ABCA3Q99758 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
ABCA3Q99758 CEACAMP10-202ENST00000495431 496 ntBASIC7.47□□□□□ -1.21
ABCA3Q99758 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.47□□□□□ -1.21
ABCA3Q99758 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC7.47□□□□□ -1.21
ABCA3Q99758 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC7.47□□□□□ -1.21
ABCA3Q99758 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC7.47□□□□□ -1.21
ABCA3Q99758 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC7.47□□□□□ -1.21
ABCA3Q99758 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC7.47□□□□□ -1.21
ABCA3Q99758 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC7.47□□□□□ -1.21
ABCA3Q99758 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC7.47□□□□□ -1.21
ABCA3Q99758 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
ABCA3Q99758 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC7.47□□□□□ -1.21
ABCA3Q99758 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
ABCA3Q99758 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
ABCA3Q99758 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
ABCA3Q99758 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
ABCA3Q99758 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.21
ABCA3Q99758 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
ABCA3Q99758 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
ABCA3Q99758 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
ABCA3Q99758 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
ABCA3Q99758 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
ABCA3Q99758 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
ABCA3Q99758 SNURFL-201ENST00000309296 343 ntBASIC7.46□□□□□ -1.22
ABCA3Q99758 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
ABCA3Q99758 AC016027.5-201ENST00000427227 210 ntBASIC7.46□□□□□ -1.22
ABCA3Q99758 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
ABCA3Q99758 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
ABCA3Q99758 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC7.46□□□□□ -1.22
ABCA3Q99758 AC006463.2-201ENST00000473326 348 ntBASIC7.46□□□□□ -1.22
ABCA3Q99758 RPL5P22-201ENST00000480199 884 ntBASIC7.46□□□□□ -1.22
ABCA3Q99758 AC093267.1-201ENST00000489176 961 ntBASIC7.46□□□□□ -1.22
ABCA3Q99758 HMGB1P40-201ENST00000525121 540 ntBASIC7.46□□□□□ -1.22
ABCA3Q99758 BRD9P1-201ENST00000529855 560 ntBASIC7.46□□□□□ -1.22
ABCA3Q99758 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC7.46□□□□□ -1.22
ABCA3Q99758 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC7.46□□□□□ -1.22
ABCA3Q99758 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC7.46□□□□□ -1.22
ABCA3Q99758 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
ABCA3Q99758 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
ABCA3Q99758 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
ABCA3Q99758 AC009831.5-201ENST00000624000 3189 ntBASIC7.46□□□□□ -1.22
ABCA3Q99758 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
ABCA3Q99758 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
ABCA3Q99758 CASC19-281ENST00000642118 1554 ntBASIC7.46□□□□□ -1.22
ABCA3Q99758 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.45□□□□□ -1.22
ABCA3Q99758 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ABCA3Q99758 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
ABCA3Q99758 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.45□□□□□ -1.22
ABCA3Q99758 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC7.45□□□□□ -1.22
ABCA3Q99758 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ABCA3Q99758 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ABCA3Q99758 SRSF1P1-201ENST00000424058 520 ntBASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms